Protein–RNA interactions for Protein: P53135

SLD3, DNA replication regulator SLD3, yeastyeast

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLD3P53135 NCA2YPR155C 1851 nt1.74□□□□□ -2.13
SLD3P53135 YDR521WYDR521W 336 nt1.74□□□□□ -2.13
SLD3P53135 YGL188C-AYGL188C-A 141 nt1.74□□□□□ -2.13
SLD3P53135 YOR011W-AYOR011W-A 207 nt1.74□□□□□ -2.13
SLD3P53135 SMC4YLR086W 4257 nt1.74□□□□□ -2.13
SLD3P53135 KIP1YBL063W 3336 nt1.74□□□□□ -2.13
SLD3P53135 TRM3YDL112W 4311 nt1.73□□□□□ -2.13
SLD3P53135 SLX4YLR135W 2247 nt1.73□□□□□ -2.13
SLD3P53135 YGL052WYGL052W 306 nt1.73□□□□□ -2.13
SLD3P53135 YMR230W-AYMR230W-A 189 nt1.73□□□□□ -2.13
SLD3P53135 IES4YOR189W 351 nt1.73□□□□□ -2.13
SLD3P53135 YOR218CYOR218C 420 nt1.73□□□□□ -2.13
SLD3P53135 PKH2YOL100W 3246 nt1.72□□□□□ -2.13
SLD3P53135 IRC20YLR247C 4671 nt1.72□□□□□ -2.13
SLD3P53135 tT(UGU)HtT(UGU)H 72 nt1.72□□□□□ -2.13
SLD3P53135 YCL023CYCL023C 348 nt1.72□□□□□ -2.13
SLD3P53135 YLR035C-AYLR035C-A 3468 nt1.71□□□□□ -2.14
SLD3P53135 YOR019WYOR019W 2193 nt1.71□□□□□ -2.14
SLD3P53135 GYP5YPL249C 2685 nt1.71□□□□□ -2.14
SLD3P53135 YMR158W-BYMR158W-B 321 nt1.7□□□□□ -2.14
SLD3P53135 BST1YFL025C 3090 nt1.7□□□□□ -2.14
SLD3P53135 YLL054CYLL054C 2532 nt1.69□□□□□ -2.14
SLD3P53135 YLR140WYLR140W 327 nt1.69□□□□□ -2.14
SLD3P53135 YBR174CYBR174C 315 nt1.69□□□□□ -2.14
SLD3P53135 VPS15YBR097W 4365 nt1.69□□□□□ -2.14
SLD3P53135 PBY1YBR094W 2262 nt1.68□□□□□ -2.14
SLD3P53135 GPG1YGL121C 381 nt1.68□□□□□ -2.14
SLD3P53135 snR14snR14 160 nt1.68□□□□□ -2.14
SLD3P53135 YBR206WYBR206W 324 nt1.68□□□□□ -2.14
SLD3P53135 YOL155W-AYOL155W-A 135 nt1.67□□□□□ -2.14
SLD3P53135 YGR109W-BYGR109W-B 4644 nt1.67□□□□□ -2.14
SLD3P53135 snR80snR80 171 nt1.66□□□□□ -2.14
SLD3P53135 ABF2YMR072W 552 nt1.66□□□□□ -2.14
SLD3P53135 YOR161W-BYOR161W-B 261 nt1.66□□□□□ -2.14
SLD3P53135 YDL206WYDL206W 2289 nt1.66□□□□□ -2.14
SLD3P53135 TRM732YMR259C 4263 nt1.66□□□□□ -2.14
SLD3P53135 YMR247W-AYMR247W-A 144 nt1.65□□□□□ -2.15
SLD3P53135 YMR307C-AYMR307C-A 195 nt1.65□□□□□ -2.15
SLD3P53135 YPR092WYPR092W 306 nt1.65□□□□□ -2.15
SLD3P53135 PAN2YGL094C 3348 nt1.65□□□□□ -2.15
SLD3P53135 MMS4YBR098W 2076 nt1.65□□□□□ -2.15
SLD3P53135 DNF3YMR162C 4971 nt1.64□□□□□ -2.15
SLD3P53135 snR55snR55 98 nt1.64□□□□□ -2.15
SLD3P53135 YMR272W-BYMR272W-B 108 nt1.64□□□□□ -2.15
SLD3P53135 AIM44YPL158C 2277 nt1.63□□□□□ -2.15
SLD3P53135 tF(GAA)QtF(GAA)Q 75 nt1.63□□□□□ -2.15
SLD3P53135 YGL041CYGL041C 204 nt1.63□□□□□ -2.15
SLD3P53135 FIG2YCR089W 4830 nt1.63□□□□□ -2.15
SLD3P53135 YLR422WYLR422W 5799 nt1.62□□□□□ -2.15
SLD3P53135 PMD1YER132C 5262 nt1.62□□□□□ -2.15
SLD3P53135 YOR093CYOR093C 4947 nt1.62□□□□□ -2.15
SLD3P53135 SWI4YER111C 3282 nt1.62□□□□□ -2.15
SLD3P53135 MEC1YBR136W 7107 nt1.61□□□□□ -2.15
SLD3P53135 PIP2YOR363C 2991 nt1.61□□□□□ -2.15
SLD3P53135 MCM10YIL150C 1716 nt1.61□□□□□ -2.15
SLD3P53135 IRA1YBR140C 9279 nt1.61□□□□□ -2.15
SLD3P53135 CFT1YDR301W 4074 nt1.61□□□□□ -2.15
SLD3P53135 EST2YLR318W 2655 nt1.61□□□□□ -2.15
SLD3P53135 SLD3YGL113W 2007 nt1.61□□□□□ -2.15
SLD3P53135 snR74snR74 88 nt1.6□□□□□ -2.15
SLD3P53135 SGF11YPL047W 300 nt1.6□□□□□ -2.15
SLD3P53135 SBE22YHR103W 2559 nt1.6□□□□□ -2.15
SLD3P53135 NPR2YEL062W 1848 nt1.59□□□□□ -2.15
SLD3P53135 MDS3YGL197W 4464 nt1.59□□□□□ -2.15
SLD3P53135 SXM1YDR395W 2835 nt1.58□□□□□ -2.16
SLD3P53135 FIG4YNL325C 2640 nt1.58□□□□□ -2.16
SLD3P53135 CDC36YDL165W 576 nt1.58□□□□□ -2.16
SLD3P53135 YAR009CYAR009C 3591 nt1.58□□□□□ -2.16
SLD3P53135 SET3YKR029C 2256 nt1.57□□□□□ -2.16
SLD3P53135 APL3YBL037W 3078 nt1.57□□□□□ -2.16
SLD3P53135 AZF1YOR113W 2745 nt1.56□□□□□ -2.16
SLD3P53135 SPG3YDR504C 384 nt1.56□□□□□ -2.16
SLD3P53135 RRT15YLR162W-A 189 nt1.56□□□□□ -2.16
SLD3P53135 AHC1YOR023C 1701 nt1.56□□□□□ -2.16
SLD3P53135 MSN5YDR335W 3675 nt1.56□□□□□ -2.16
SLD3P53135 YBR221W-AYBR221W-A 105 nt1.55□□□□□ -2.16
SLD3P53135 NUP188YML103C 4968 nt1.55□□□□□ -2.16
SLD3P53135 STO1YMR125W 2586 nt1.54□□□□□ -2.16
SLD3P53135 NUP145YGL092W 3954 nt1.53□□□□□ -2.16
SLD3P53135 YIR030W-AYIR030W-A 384 nt1.53□□□□□ -2.16
SLD3P53135 PFD1YJL179W 330 nt1.53□□□□□ -2.16
SLD3P53135 YOR072W-BYOR072W-B 162 nt1.53□□□□□ -2.16
SLD3P53135 YBR182C-AYBR182C-A 195 nt1.53□□□□□ -2.16
SLD3P53135 YLL020CYLL020C 306 nt1.52□□□□□ -2.17
SLD3P53135 SPC110YDR356W 2835 nt1.52□□□□□ -2.17
SLD3P53135 ECM12YHR021W-A 456 nt1.51□□□□□ -2.17
SLD3P53135 CLU1YMR012W 3834 nt1.51□□□□□ -2.17
SLD3P53135 YOR302WYOR302W 78 nt1.51□□□□□ -2.17
SLD3P53135 POL5YEL055C 3069 nt1.51□□□□□ -2.17
SLD3P53135 YKU70YMR284W 1809 nt1.5□□□□□ -2.17
SLD3P53135 YLL019W-AYLL019W-A 93 nt1.49□□□□□ -2.17
SLD3P53135 YDR354C-AYDR354C-A 144 nt1.48□□□□□ -2.17
SLD3P53135 JLP2YMR132C 627 nt1.48□□□□□ -2.17
SLD3P53135 ROM2YLR371W 4071 nt1.48□□□□□ -2.17
SLD3P53135 CHS1YNL192W 3396 nt1.47□□□□□ -2.17
SLD3P53135 OLI1Q0130 231 nt1.47□□□□□ -2.17
SLD3P53135 YJL026C-AYJL026C-A 222 nt1.47□□□□□ -2.17
SLD3P53135 YBR200W-AYBR200W-A 165 nt1.47□□□□□ -2.17
SLD3P53135 CCH1YGR217W 6120 nt1.47□□□□□ -2.17
SLD3P53135 CDC39YCR093W 6327 nt1.47□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 62.4 ms