Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EFNA3P52797 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EFNA3P52797 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.83■□□□□ 0.6
EFNA3P52797 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
EFNA3P52797 AC023632.3-201ENST00000521633 145 ntBASIC18.83■□□□□ 0.6
EFNA3P52797 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.83■□□□□ 0.6
EFNA3P52797 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.83■□□□□ 0.6
EFNA3P52797 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.83■□□□□ 0.6
EFNA3P52797 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EFNA3P52797 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
EFNA3P52797 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
EFNA3P52797 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EFNA3P52797 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
EFNA3P52797 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.83■□□□□ 0.6
EFNA3P52797 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
EFNA3P52797 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EFNA3P52797 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EFNA3P52797 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNA3P52797 DPP3P2-201ENST00000416030 1696 ntBASIC18.82■□□□□ 0.6
EFNA3P52797 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNA3P52797 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNA3P52797 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.82■□□□□ 0.6
EFNA3P52797 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNA3P52797 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
EFNA3P52797 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.82■□□□□ 0.6
EFNA3P52797 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
EFNA3P52797 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EFNA3P52797 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.82■□□□□ 0.6
EFNA3P52797 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
EFNA3P52797 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.82■□□□□ 0.6
EFNA3P52797 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.82■□□□□ 0.6
EFNA3P52797 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.82■□□□□ 0.6
EFNA3P52797 AL359736.2-201ENST00000621992 437 ntBASIC18.82■□□□□ 0.6
EFNA3P52797 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNA3P52797 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNA3P52797 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNA3P52797 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNA3P52797 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
EFNA3P52797 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNA3P52797 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EFNA3P52797 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNA3P52797 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.81■□□□□ 0.6
EFNA3P52797 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
EFNA3P52797 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.81■□□□□ 0.6
EFNA3P52797 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNA3P52797 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNA3P52797 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.81■□□□□ 0.6
EFNA3P52797 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EFNA3P52797 AL158047.1-201ENST00000445918 881 ntBASIC18.81■□□□□ 0.6
EFNA3P52797 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.81■□□□□ 0.6
EFNA3P52797 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.81■□□□□ 0.6
EFNA3P52797 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.81■□□□□ 0.6
EFNA3P52797 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.81■□□□□ 0.6
EFNA3P52797 AC142381.4-202ENST00000563973 229 ntBASIC18.81■□□□□ 0.6
EFNA3P52797 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.81■□□□□ 0.6
EFNA3P52797 RN7SL471P-201ENST00000580476 299 ntBASIC18.81■□□□□ 0.6
EFNA3P52797 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EFNA3P52797 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EFNA3P52797 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNA3P52797 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNA3P52797 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNA3P52797 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNA3P52797 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFNA3P52797 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EFNA3P52797 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
EFNA3P52797 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EFNA3P52797 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFNA3P52797 AC073314.1-201ENST00000568729 2216 ntBASIC18.8■□□□□ 0.6
EFNA3P52797 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFNA3P52797 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFNA3P52797 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFNA3P52797 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.8■□□□□ 0.6
EFNA3P52797 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EFNA3P52797 KRT17P3-201ENST00000420566 1262 ntBASIC18.8■□□□□ 0.6
EFNA3P52797 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
EFNA3P52797 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
EFNA3P52797 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.8■□□□□ 0.6
EFNA3P52797 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
EFNA3P52797 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFNA3P52797 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFNA3P52797 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFNA3P52797 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
EFNA3P52797 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
EFNA3P52797 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
EFNA3P52797 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFNA3P52797 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
EFNA3P52797 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.8■□□□□ 0.6
EFNA3P52797 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.79■□□□□ 0.6
EFNA3P52797 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.79■□□□□ 0.6
EFNA3P52797 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFNA3P52797 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFNA3P52797 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
EFNA3P52797 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EFNA3P52797 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFNA3P52797 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.79■□□□□ 0.6
EFNA3P52797 MTDHP1-201ENST00000605323 784 ntBASIC18.79■□□□□ 0.6
EFNA3P52797 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.79■□□□□ 0.6
EFNA3P52797 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFNA3P52797 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.79■□□□□ 0.6
EFNA3P52797 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms