Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ASCL1P50553 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.84■□□□□ 0.45
ASCL1P50553 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
ASCL1P50553 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.84■□□□□ 0.45
ASCL1P50553 AL023875.1-201ENST00000640777 796 ntBASIC17.84■□□□□ 0.45
ASCL1P50553 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ASCL1P50553 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ASCL1P50553 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ASCL1P50553 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ASCL1P50553 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ASCL1P50553 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ASCL1P50553 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ASCL1P50553 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ASCL1P50553 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.83■□□□□ 0.45
ASCL1P50553 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ASCL1P50553 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
ASCL1P50553 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
ASCL1P50553 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ASCL1P50553 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
ASCL1P50553 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.83■□□□□ 0.44
ASCL1P50553 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ASCL1P50553 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ASCL1P50553 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ASCL1P50553 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ASCL1P50553 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
ASCL1P50553 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.83■□□□□ 0.44
ASCL1P50553 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.83■□□□□ 0.44
ASCL1P50553 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ASCL1P50553 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.83■□□□□ 0.44
ASCL1P50553 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ASCL1P50553 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.83■□□□□ 0.44
ASCL1P50553 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.83■□□□□ 0.44
ASCL1P50553 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.83■□□□□ 0.44
ASCL1P50553 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ASCL1P50553 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ASCL1P50553 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
ASCL1P50553 AC073912.3-201ENST00000624414 853 ntBASIC17.83■□□□□ 0.44
ASCL1P50553 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ASCL1P50553 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ASCL1P50553 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.83■□□□□ 0.44
ASCL1P50553 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.83■□□□□ 0.44
ASCL1P50553 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ASCL1P50553 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ASCL1P50553 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
ASCL1P50553 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.83■□□□□ 0.44
ASCL1P50553 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ASCL1P50553 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ASCL1P50553 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
ASCL1P50553 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ASCL1P50553 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASCL1P50553 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASCL1P50553 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASCL1P50553 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASCL1P50553 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.82■□□□□ 0.44
ASCL1P50553 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ASCL1P50553 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
ASCL1P50553 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ASCL1P50553 AC233702.5-201ENST00000584107 538 ntBASIC17.82■□□□□ 0.44
ASCL1P50553 AP001412.1-201ENST00000608405 714 ntBASIC17.82■□□□□ 0.44
ASCL1P50553 AC110285.5-201ENST00000611501 352 ntBASIC17.82■□□□□ 0.44
ASCL1P50553 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ASCL1P50553 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASCL1P50553 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.82■□□□□ 0.44
ASCL1P50553 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASCL1P50553 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ASCL1P50553 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ASCL1P50553 AL135905.2-201ENST00000584934 1404 ntBASIC17.81■□□□□ 0.44
ASCL1P50553 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ASCL1P50553 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ASCL1P50553 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.81■□□□□ 0.44
ASCL1P50553 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ASCL1P50553 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
ASCL1P50553 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.81■□□□□ 0.44
ASCL1P50553 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.81■□□□□ 0.44
ASCL1P50553 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ASCL1P50553 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ASCL1P50553 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ASCL1P50553 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ASCL1P50553 RPS2P55-201ENST00000397318 883 ntBASIC17.81■□□□□ 0.44
ASCL1P50553 KRASP1-201ENST00000407852 552 ntBASIC17.81■□□□□ 0.44
ASCL1P50553 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.81■□□□□ 0.44
ASCL1P50553 AC107956.1-201ENST00000494359 873 ntBASIC17.81■□□□□ 0.44
ASCL1P50553 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.81■□□□□ 0.44
ASCL1P50553 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.81■□□□□ 0.44
ASCL1P50553 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.81■□□□□ 0.44
ASCL1P50553 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.81■□□□□ 0.44
ASCL1P50553 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ASCL1P50553 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ASCL1P50553 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ASCL1P50553 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ASCL1P50553 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ASCL1P50553 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ASCL1P50553 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ASCL1P50553 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ASCL1P50553 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ASCL1P50553 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ASCL1P50553 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ASCL1P50553 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.8■□□□□ 0.44
ASCL1P50553 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ASCL1P50553 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms