Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 PIG1YLR273C 1947 nt2.4□□□□□ -2.02
VPS53P47061 CHC1YGL206C 4962 nt2.4□□□□□ -2.02
VPS53P47061 YKL165C-AYKL165C-A 234 nt2.4□□□□□ -2.03
VPS53P47061 YOR343W-BYOR343W-B 5313 nt2.4□□□□□ -2.03
VPS53P47061 YFR016CYFR016C 3702 nt2.4□□□□□ -2.03
VPS53P47061 KOG1YHR186C 4674 nt2.39□□□□□ -2.03
VPS53P47061 YBR221W-AYBR221W-A 105 nt2.39□□□□□ -2.03
VPS53P47061 DGR2YKL121W 2559 nt2.39□□□□□ -2.03
VPS53P47061 GIP3YPL137C 3831 nt2.38□□□□□ -2.03
VPS53P47061 MSH5YDL154W 2706 nt2.38□□□□□ -2.03
VPS53P47061 YIL134C-AYIL134C-A 204 nt2.38□□□□□ -2.03
VPS53P47061 YCL001W-BYCL001W-B 255 nt2.38□□□□□ -2.03
VPS53P47061 TOF1YNL273W 3717 nt2.38□□□□□ -2.03
VPS53P47061 GYP5YPL249C 2685 nt2.38□□□□□ -2.03
VPS53P47061 TOR2YKL203C 7425 nt2.38□□□□□ -2.03
VPS53P47061 MAK10YEL053C 2202 nt2.38□□□□□ -2.03
VPS53P47061 RAV1YJR033C 4074 nt2.38□□□□□ -2.03
VPS53P47061 TFC3YAL001C 3483 nt2.37□□□□□ -2.03
VPS53P47061 YOR102WYOR102W 351 nt2.37□□□□□ -2.03
VPS53P47061 YPL044CYPL044C 549 nt2.37□□□□□ -2.03
VPS53P47061 HSL1YKL101W 4557 nt2.36□□□□□ -2.03
VPS53P47061 YHL015W-AYHL015W-A 84 nt2.36□□□□□ -2.03
VPS53P47061 MLH3YPL164C 2148 nt2.35□□□□□ -2.03
VPS53P47061 SLD3YGL113W 2007 nt2.35□□□□□ -2.03
VPS53P47061 PTP2YOR208W 2253 nt2.35□□□□□ -2.03
VPS53P47061 YDR341CYDR341C 1824 nt2.35□□□□□ -2.03
VPS53P47061 KIP1YBL063W 3336 nt2.35□□□□□ -2.03
VPS53P47061 IFH1YLR223C 3258 nt2.34□□□□□ -2.03
VPS53P47061 YDR521WYDR521W 336 nt2.34□□□□□ -2.03
VPS53P47061 YHR180W-AYHR180W-A 183 nt2.34□□□□□ -2.03
VPS53P47061 TRL1YJL087C 2484 nt2.33□□□□□ -2.04
VPS53P47061 RTT107YHR154W 3213 nt2.33□□□□□ -2.04
VPS53P47061 YJL022WYJL022W 309 nt2.33□□□□□ -2.04
VPS53P47061 SAP185YJL098W 3177 nt2.33□□□□□ -2.04
VPS53P47061 ALK1YGL021W 2283 nt2.32□□□□□ -2.04
VPS53P47061 YDR354C-AYDR354C-A 144 nt2.32□□□□□ -2.04
VPS53P47061 YIL071W-AYIL071W-A 477 nt2.32□□□□□ -2.04
VPS53P47061 YOR314W-AYOR314W-A 111 nt2.32□□□□□ -2.04
VPS53P47061 YBR206WYBR206W 324 nt2.32□□□□□ -2.04
VPS53P47061 UBP2YOR124C 3819 nt2.32□□□□□ -2.04
VPS53P47061 IST2YBR086C 2841 nt2.31□□□□□ -2.04
VPS53P47061 YER053C-AYER053C-A 114 nt2.31□□□□□ -2.04
VPS53P47061 YJL052C-AYJL052C-A 120 nt2.31□□□□□ -2.04
VPS53P47061 RPS30BYOR182C 192 nt2.31□□□□□ -2.04
VPS53P47061 PBY1YBR094W 2262 nt2.31□□□□□ -2.04
VPS53P47061 UFD4YKL010C 4452 nt2.3□□□□□ -2.04
VPS53P47061 HMI1YOL095C 2121 nt2.3□□□□□ -2.04
VPS53P47061 SYH1YPL105C 2550 nt2.3□□□□□ -2.04
VPS53P47061 FAB1YFR019W 6837 nt2.3□□□□□ -2.04
VPS53P47061 YGR109W-BYGR109W-B 4644 nt2.29□□□□□ -2.04
VPS53P47061 RPL37BYDR500C 267 nt2.29□□□□□ -2.04
VPS53P47061 ANS1YHR126C 480 nt2.29□□□□□ -2.04
VPS53P47061 YKR075W-AYKR075W-A 270 nt2.29□□□□□ -2.04
VPS53P47061 AGC1YPR021C 2709 nt2.29□□□□□ -2.04
VPS53P47061 COX12YLR038C 252 nt2.28□□□□□ -2.04
VPS53P47061 RTT101YJL047C 2529 nt2.28□□□□□ -2.04
VPS53P47061 SBE22YHR103W 2559 nt2.27□□□□□ -2.05
VPS53P47061 INO80YGL150C 4470 nt2.27□□□□□ -2.05
VPS53P47061 YCR038W-AYCR038W-A 126 nt2.27□□□□□ -2.05
VPS53P47061 YJL026C-AYJL026C-A 222 nt2.27□□□□□ -2.05
VPS53P47061 DGR1YNL130C-A 147 nt2.27□□□□□ -2.05
VPS53P47061 CDC60YPL160W 3273 nt2.27□□□□□ -2.05
VPS53P47061 SPP41YDR464W 4308 nt2.26□□□□□ -2.05
VPS53P47061 CTF4YPR135W 2784 nt2.26□□□□□ -2.05
VPS53P47061 YFR012W-AYFR012W-A 87 nt2.26□□□□□ -2.05
VPS53P47061 YMR175W-AYMR175W-A 195 nt2.26□□□□□ -2.05
VPS53P47061 CDC31YOR257W 486 nt2.26□□□□□ -2.05
VPS53P47061 BRE1YDL074C 2103 nt2.25□□□□□ -2.05
VPS53P47061 YDR544CYDR544C 429 nt2.25□□□□□ -2.05
VPS53P47061 YER172C-AYER172C-A 381 nt2.25□□□□□ -2.05
VPS53P47061 YLR035C-AYLR035C-A 3468 nt2.25□□□□□ -2.05
VPS53P47061 HIR3YJR140C 4947 nt2.25□□□□□ -2.05
VPS53P47061 CTR9YOL145C 3234 nt2.25□□□□□ -2.05
VPS53P47061 MDS3YGL197W 4464 nt2.24□□□□□ -2.05
VPS53P47061 PAA1YDR071C 576 nt2.24□□□□□ -2.05
VPS53P47061 PKH2YOL100W 3246 nt2.23□□□□□ -2.05
VPS53P47061 COG4YPR105C 2586 nt2.23□□□□□ -2.05
VPS53P47061 BUD2YKL092C 3315 nt2.23□□□□□ -2.05
VPS53P47061 SEC31YDL195W 3822 nt2.23□□□□□ -2.05
VPS53P47061 tL(UAA)QtL(UAA)Q 85 nt2.23□□□□□ -2.05
VPS53P47061 FKS1YLR342W 5631 nt2.23□□□□□ -2.05
VPS53P47061 YNL144CYNL144C 2223 nt2.22□□□□□ -2.05
VPS53P47061 YCR087C-AYCR087C-A 462 nt2.22□□□□□ -2.05
VPS53P47061 TFB5YDR079C-A 219 nt2.22□□□□□ -2.05
VPS53P47061 PET309YLR067C 2898 nt2.22□□□□□ -2.05
VPS53P47061 YOR093CYOR093C 4947 nt2.21□□□□□ -2.06
VPS53P47061 RGA1YOR127W 3024 nt2.21□□□□□ -2.06
VPS53P47061 YHR214C-BYHR214C-B 5382 nt2.21□□□□□ -2.06
VPS53P47061 SLI15YBR156C 2097 nt2.2□□□□□ -2.06
VPS53P47061 IRE1YHR079C 3348 nt2.19□□□□□ -2.06
VPS53P47061 YMR326CYMR326C 309 nt2.18□□□□□ -2.06
VPS53P47061 TTI1YKL033W 3117 nt2.18□□□□□ -2.06
VPS53P47061 USO1YDL058W 5373 nt2.17□□□□□ -2.06
VPS53P47061 YIL002W-AYIL002W-A 210 nt2.17□□□□□ -2.06
VPS53P47061 YLR419WYLR419W 4308 nt2.16□□□□□ -2.06
VPS53P47061 PMP2YEL017C-A 132 nt2.16□□□□□ -2.06
VPS53P47061 YNL103W-AYNL103W-A 90 nt2.16□□□□□ -2.06
VPS53P47061 ATG9YDL149W 2994 nt2.16□□□□□ -2.06
VPS53P47061 BPH1YCR032W 6504 nt2.15□□□□□ -2.07
VPS53P47061 YDL118WYDL118W 381 nt2.15□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 55.1 ms