Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CBX5P45973 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX5P45973 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CBX5P45973 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX5P45973 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX5P45973 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.22■□□□□ 0.35
CBX5P45973 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CBX5P45973 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX5P45973 POU5F1P4-201ENST00000413175 1085 ntBASIC17.22■□□□□ 0.35
CBX5P45973 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX5P45973 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX5P45973 MIR4767-201ENST00000582827 78 ntBASIC17.22■□□□□ 0.35
CBX5P45973 AC008175.2-201ENST00000612840 297 ntBASIC17.22■□□□□ 0.35
CBX5P45973 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.22■□□□□ 0.35
CBX5P45973 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX5P45973 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.22■□□□□ 0.35
CBX5P45973 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
CBX5P45973 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.22■□□□□ 0.35
CBX5P45973 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX5P45973 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.22■□□□□ 0.35
CBX5P45973 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.22■□□□□ 0.35
CBX5P45973 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
CBX5P45973 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.22■□□□□ 0.35
CBX5P45973 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CBX5P45973 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CBX5P45973 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.21■□□□□ 0.35
CBX5P45973 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX5P45973 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX5P45973 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX5P45973 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.21■□□□□ 0.35
CBX5P45973 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX5P45973 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX5P45973 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX5P45973 AC005082.1-201ENST00000413042 2259 ntBASIC17.21■□□□□ 0.35
CBX5P45973 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX5P45973 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX5P45973 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CBX5P45973 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX5P45973 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX5P45973 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX5P45973 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.21■□□□□ 0.35
CBX5P45973 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX5P45973 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CBX5P45973 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.21■□□□□ 0.35
CBX5P45973 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX5P45973 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX5P45973 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CBX5P45973 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CBX5P45973 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.21■□□□□ 0.35
CBX5P45973 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX5P45973 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.21■□□□□ 0.35
CBX5P45973 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX5P45973 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX5P45973 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CBX5P45973 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CBX5P45973 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CBX5P45973 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX5P45973 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CBX5P45973 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.2■□□□□ 0.34
CBX5P45973 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX5P45973 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX5P45973 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.2■□□□□ 0.34
CBX5P45973 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX5P45973 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX5P45973 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX5P45973 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX5P45973 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.2■□□□□ 0.34
CBX5P45973 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.2■□□□□ 0.34
CBX5P45973 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX5P45973 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CBX5P45973 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX5P45973 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX5P45973 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX5P45973 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.2■□□□□ 0.34
CBX5P45973 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX5P45973 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX5P45973 AC011270.2-201ENST00000624293 2550 ntBASIC17.2■□□□□ 0.34
CBX5P45973 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.2■□□□□ 0.34
CBX5P45973 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX5P45973 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX5P45973 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX5P45973 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX5P45973 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CBX5P45973 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX5P45973 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.19■□□□□ 0.34
CBX5P45973 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX5P45973 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.19■□□□□ 0.34
CBX5P45973 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CBX5P45973 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX5P45973 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.19■□□□□ 0.34
CBX5P45973 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CBX5P45973 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.19■□□□□ 0.34
CBX5P45973 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX5P45973 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX5P45973 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX5P45973 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX5P45973 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX5P45973 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX5P45973 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CBX5P45973 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms