Protein–RNA interactions for Protein: P42839

VNX1, Low affinity vacuolar monovalent cation/H(+) antiporter, yeastyeast

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VNX1P42839 tD(GUC)QtD(GUC)Q 75 nt3.26□□□□□ -1.89
VNX1P42839 YML054C-AYML054C-A 159 nt3.26□□□□□ -1.89
VNX1P42839 RAD9YDR217C 3930 nt3.25□□□□□ -1.89
VNX1P42839 STE23YLR389C 3084 nt3.25□□□□□ -1.89
VNX1P42839 PAU10YDR542W 363 nt3.25□□□□□ -1.89
VNX1P42839 PAU4YLR461W 363 nt3.25□□□□□ -1.89
VNX1P42839 TAF1YGR274C 3201 nt3.25□□□□□ -1.89
VNX1P42839 ISW1YBR245C 3390 nt3.25□□□□□ -1.89
VNX1P42839 TRS130YMR218C 3309 nt3.24□□□□□ -1.89
VNX1P42839 POL5YEL055C 3069 nt3.23□□□□□ -1.89
VNX1P42839 NUP159YIL115C 4383 nt3.23□□□□□ -1.89
VNX1P42839 YHR080CYHR080C 4038 nt3.23□□□□□ -1.89
VNX1P42839 IKI3YLR384C 4050 nt3.21□□□□□ -1.9
VNX1P42839 RPO41YFL036W 4056 nt3.2□□□□□ -1.9
VNX1P42839 YPR097WYPR097W 3222 nt3.2□□□□□ -1.9
VNX1P42839 SLA1YBL007C 3735 nt3.2□□□□□ -1.9
VNX1P42839 MET5YJR137C 4329 nt3.2□□□□□ -1.9
VNX1P42839 SCP160YJL080C 3669 nt3.2□□□□□ -1.9
VNX1P42839 UFD4YKL010C 4452 nt3.19□□□□□ -1.9
VNX1P42839 ADR1YDR216W 3972 nt3.19□□□□□ -1.9
VNX1P42839 MRD1YPR112C 2664 nt3.18□□□□□ -1.9
VNX1P42839 YDL159C-BYDL159C-B 177 nt3.18□□□□□ -1.9
VNX1P42839 RPL26BYGR034W 384 nt3.18□□□□□ -1.9
VNX1P42839 SIN3YOL004W 4611 nt3.18□□□□□ -1.9
VNX1P42839 ENA5YDR038C 3276 nt3.17□□□□□ -1.9
VNX1P42839 ENA2YDR039C 3276 nt3.17□□□□□ -1.9
VNX1P42839 ENA1YDR040C 3276 nt3.17□□□□□ -1.9
VNX1P42839 NNF2YGR089W 2811 nt3.17□□□□□ -1.9
VNX1P42839 ANS1YHR126C 480 nt3.17□□□□□ -1.9
VNX1P42839 SIP4YJL089W 2490 nt3.17□□□□□ -1.9
VNX1P42839 YDL073WYDL073W 2955 nt3.17□□□□□ -1.9
VNX1P42839 MMS22YLR320W 4365 nt3.16□□□□□ -1.9
VNX1P42839 VPS16YPL045W 2397 nt3.16□□□□□ -1.9
VNX1P42839 AKR1YDR264C 2295 nt3.16□□□□□ -1.9
VNX1P42839 SSM4YIL030C 3960 nt3.16□□□□□ -1.9
VNX1P42839 AGC1YPR021C 2709 nt3.15□□□□□ -1.9
VNX1P42839 YBT1YLL048C 4986 nt3.15□□□□□ -1.9
VNX1P42839 SEC26YDR238C 2922 nt3.15□□□□□ -1.9
VNX1P42839 RAD26YJR035W 3258 nt3.14□□□□□ -1.91
VNX1P42839 SEY1YOR165W 2331 nt3.14□□□□□ -1.91
VNX1P42839 RGA1YOR127W 3024 nt3.14□□□□□ -1.91
VNX1P42839 MSH5YDL154W 2706 nt3.13□□□□□ -1.91
VNX1P42839 PDR3YBL005W 2931 nt3.13□□□□□ -1.91
VNX1P42839 YDR464C-AYDR464C-A 189 nt3.13□□□□□ -1.91
VNX1P42839 STU1YBL034C 4542 nt3.12□□□□□ -1.91
VNX1P42839 FLO9YAL063C 3969 nt3.12□□□□□ -1.91
VNX1P42839 DAN4YJR151C 3486 nt3.12□□□□□ -1.91
VNX1P42839 RPS28BYLR264W 204 nt3.12□□□□□ -1.91
VNX1P42839 BUD4YJR092W 4344 nt3.12□□□□□ -1.91
VNX1P42839 SMC3YJL074C 3693 nt3.11□□□□□ -1.91
VNX1P42839 YER172C-AYER172C-A 381 nt3.11□□□□□ -1.91
VNX1P42839 tV(CAC)DtV(CAC)D 73 nt3.11□□□□□ -1.91
VNX1P42839 tV(CAC)HtV(CAC)H 73 nt3.11□□□□□ -1.91
VNX1P42839 snR40snR40 97 nt3.11□□□□□ -1.91
VNX1P42839 EST2YLR318W 2655 nt3.11□□□□□ -1.91
VNX1P42839 STE6YKL209C 3873 nt3.11□□□□□ -1.91
VNX1P42839 RPA135YPR010C 3612 nt3.1□□□□□ -1.91
VNX1P42839 ALY2YJL084C 3141 nt3.1□□□□□ -1.91
VNX1P42839 YDR209CYDR209C 414 nt3.1□□□□□ -1.91
VNX1P42839 VAS1YGR094W 3315 nt3.1□□□□□ -1.91
VNX1P42839 BUD2YKL092C 3315 nt3.09□□□□□ -1.91
VNX1P42839 ROM1YGR070W 3468 nt3.09□□□□□ -1.91
VNX1P42839 JSN1YJR091C 3276 nt3.08□□□□□ -1.92
VNX1P42839 tF(GAA)DtF(GAA)D 73 nt3.08□□□□□ -1.92
VNX1P42839 tF(GAA)NtF(GAA)N 73 nt3.08□□□□□ -1.92
VNX1P42839 DSE4YNR067C 3354 nt3.08□□□□□ -1.92
VNX1P42839 URA2YJL130C 6645 nt3.07□□□□□ -1.92
VNX1P42839 tK(UUU)DtK(UUU)D 73 nt3.06□□□□□ -1.92
VNX1P42839 tK(UUU)G1tK(UUU)G1 73 nt3.06□□□□□ -1.92
VNX1P42839 tK(UUU)G2tK(UUU)G2 73 nt3.06□□□□□ -1.92
VNX1P42839 tK(UUU)KtK(UUU)K 73 nt3.06□□□□□ -1.92
VNX1P42839 tK(UUU)LtK(UUU)L 73 nt3.06□□□□□ -1.92
VNX1P42839 tK(UUU)OtK(UUU)O 73 nt3.06□□□□□ -1.92
VNX1P42839 tK(UUU)PtK(UUU)P 73 nt3.06□□□□□ -1.92
VNX1P42839 YMR122W-AYMR122W-A 255 nt3.06□□□□□ -1.92
VNX1P42839 SPA2YLL021W 4401 nt3.06□□□□□ -1.92
VNX1P42839 CHS1YNL192W 3396 nt3.05□□□□□ -1.92
VNX1P42839 YLR278CYLR278C 4026 nt3.05□□□□□ -1.92
VNX1P42839 snR14snR14 160 nt3.05□□□□□ -1.92
VNX1P42839 CAF120YNL278W 3183 nt3.04□□□□□ -1.92
VNX1P42839 SPC110YDR356W 2835 nt3.04□□□□□ -1.92
VNX1P42839 STT4YLR305C 5703 nt3.04□□□□□ -1.92
VNX1P42839 TSC11YER093C 4293 nt3.03□□□□□ -1.92
VNX1P42839 YAL042C-AYAL042C-A 378 nt3.02□□□□□ -1.93
VNX1P42839 MYO2YOR326W 4725 nt3.02□□□□□ -1.93
VNX1P42839 TFC4YGR047C 3078 nt3.01□□□□□ -1.93
VNX1P42839 RDS3YPR094W 324 nt3.01□□□□□ -1.93
VNX1P42839 MDN1YLR106C 14733 nt3.01□□□□□ -1.93
VNX1P42839 RAX2YLR084C 3663 nt3□□□□□ -1.93
VNX1P42839 RPS21AYKR057W 264 nt2.99□□□□□ -1.93
VNX1P42839 YOR055WYOR055W 435 nt2.99□□□□□ -1.93
VNX1P42839 RGR1YLR071C 3249 nt2.99□□□□□ -1.93
VNX1P42839 YEL025CYEL025C 3567 nt2.99□□□□□ -1.93
VNX1P42839 RIF1YBR275C 5751 nt2.97□□□□□ -1.93
VNX1P42839 SMC6YLR383W 3345 nt2.97□□□□□ -1.93
VNX1P42839 GCN2YDR283C 4980 nt2.96□□□□□ -1.94
VNX1P42839 RRP5YMR229C 5190 nt2.96□□□□□ -1.94
VNX1P42839 TRM3YDL112W 4311 nt2.96□□□□□ -1.94
VNX1P42839 BUB1YGR188C 3066 nt2.96□□□□□ -1.94
VNX1P42839 RPA190YOR341W 4995 nt2.95□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 34.8 ms