Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 PTP2YOR208W 2253 nt1.45□□□□□ -2.18
VPS52P39904 VPS54YDR027C 2670 nt1.44□□□□□ -2.18
VPS52P39904 YGL052WYGL052W 306 nt1.44□□□□□ -2.18
VPS52P39904 RPS27BYHR021C 249 nt1.44□□□□□ -2.18
VPS52P39904 SLI15YBR156C 2097 nt1.44□□□□□ -2.18
VPS52P39904 CAT8YMR280C 4302 nt1.43□□□□□ -2.18
VPS52P39904 snR55snR55 98 nt1.43□□□□□ -2.18
VPS52P39904 RPL31AYDL075W 342 nt1.43□□□□□ -2.18
VPS52P39904 YMR230W-AYMR230W-A 189 nt1.43□□□□□ -2.18
VPS52P39904 CDC31YOR257W 486 nt1.43□□□□□ -2.18
VPS52P39904 YBR174CYBR174C 315 nt1.43□□□□□ -2.18
VPS52P39904 SEC5YDR166C 2916 nt1.43□□□□□ -2.18
VPS52P39904 ADR1YDR216W 3972 nt1.43□□□□□ -2.18
VPS52P39904 NUT1YGL151W 3399 nt1.42□□□□□ -2.18
VPS52P39904 YLL007CYLL007C 1998 nt1.42□□□□□ -2.18
VPS52P39904 RPS25BYLR333C 327 nt1.42□□□□□ -2.18
VPS52P39904 YBL008W-AYBL008W-A 240 nt1.42□□□□□ -2.18
VPS52P39904 IES4YOR189W 351 nt1.42□□□□□ -2.18
VPS52P39904 RAD50YNL250W 3939 nt1.42□□□□□ -2.18
VPS52P39904 COG4YPR105C 2586 nt1.42□□□□□ -2.18
VPS52P39904 CTF4YPR135W 2784 nt1.42□□□□□ -2.18
VPS52P39904 PKH2YOL100W 3246 nt1.41□□□□□ -2.18
VPS52P39904 UFD2YDL190C 2886 nt1.41□□□□□ -2.18
VPS52P39904 snR80snR80 171 nt1.41□□□□□ -2.18
VPS52P39904 SPG3YDR504C 384 nt1.41□□□□□ -2.18
VPS52P39904 ABF2YMR072W 552 nt1.41□□□□□ -2.18
VPS52P39904 YMR307C-AYMR307C-A 195 nt1.41□□□□□ -2.18
VPS52P39904 YOR015WYOR015W 360 nt1.41□□□□□ -2.18
VPS52P39904 SPO21YOL091W 1830 nt1.4□□□□□ -2.18
VPS52P39904 KCS1YDR017C 3153 nt1.4□□□□□ -2.19
VPS52P39904 YGL041CYGL041C 204 nt1.4□□□□□ -2.19
VPS52P39904 YJL120WYJL120W 324 nt1.4□□□□□ -2.19
VPS52P39904 SPC110YDR356W 2835 nt1.4□□□□□ -2.19
VPS52P39904 CCH1YGR217W 6120 nt1.4□□□□□ -2.19
VPS52P39904 CDC36YDL165W 576 nt1.39□□□□□ -2.19
VPS52P39904 ALK1YGL021W 2283 nt1.38□□□□□ -2.19
VPS52P39904 PBY1YBR094W 2262 nt1.38□□□□□ -2.19
VPS52P39904 YJL022WYJL022W 309 nt1.38□□□□□ -2.19
VPS52P39904 PFD1YJL179W 330 nt1.38□□□□□ -2.19
VPS52P39904 VPS55YJR044C 423 nt1.38□□□□□ -2.19
VPS52P39904 COF1YLL050C 432 nt1.38□□□□□ -2.19
VPS52P39904 YOR011W-AYOR011W-A 207 nt1.38□□□□□ -2.19
VPS52P39904 YPR092WYPR092W 306 nt1.38□□□□□ -2.19
VPS52P39904 MCM10YIL150C 1716 nt1.37□□□□□ -2.19
VPS52P39904 IFH1YLR223C 3258 nt1.37□□□□□ -2.19
VPS52P39904 MON2YNL297C 4911 nt1.37□□□□□ -2.19
VPS52P39904 GPG1YGL121C 381 nt1.37□□□□□ -2.19
VPS52P39904 YGL217CYGL217C 342 nt1.37□□□□□ -2.19
VPS52P39904 YOR376WYOR376W 369 nt1.37□□□□□ -2.19
VPS52P39904 SLX4YLR135W 2247 nt1.37□□□□□ -2.19
VPS52P39904 SMC4YLR086W 4257 nt1.37□□□□□ -2.19
VPS52P39904 SXM1YDR395W 2835 nt1.37□□□□□ -2.19
VPS52P39904 YLL054CYLL054C 2532 nt1.36□□□□□ -2.19
VPS52P39904 MSH3YCR092C 3057 nt1.36□□□□□ -2.19
VPS52P39904 YDR521WYDR521W 336 nt1.36□□□□□ -2.19
VPS52P39904 POL5YEL055C 3069 nt1.36□□□□□ -2.19
VPS52P39904 tF(GAA)QtF(GAA)Q 75 nt1.35□□□□□ -2.19
VPS52P39904 YLR140WYLR140W 327 nt1.35□□□□□ -2.19
VPS52P39904 YCS4YLR272C 3531 nt1.35□□□□□ -2.19
VPS52P39904 NCA2YPR155C 1851 nt1.35□□□□□ -2.19
VPS52P39904 AIM44YPL158C 2277 nt1.35□□□□□ -2.19
VPS52P39904 FYV8YGR196C 2454 nt1.34□□□□□ -2.19
VPS52P39904 ALY2YJL084C 3141 nt1.34□□□□□ -2.19
VPS52P39904 tM(CAU)Q1tM(CAU)Q1 76 nt1.34□□□□□ -2.19
VPS52P39904 JLP2YMR132C 627 nt1.34□□□□□ -2.19
VPS52P39904 PET127YOR017W 2403 nt1.34□□□□□ -2.2
VPS52P39904 BLI1YKL061W 342 nt1.33□□□□□ -2.2
VPS52P39904 KAP122YGL016W 3246 nt1.33□□□□□ -2.2
VPS52P39904 HKR1YDR420W 5409 nt1.33□□□□□ -2.2
VPS52P39904 MMS4YBR098W 2076 nt1.33□□□□□ -2.2
VPS52P39904 YLR419WYLR419W 4308 nt1.33□□□□□ -2.2
VPS52P39904 BST1YFL025C 3090 nt1.32□□□□□ -2.2
VPS52P39904 RRT15YLR162W-A 189 nt1.32□□□□□ -2.2
VPS52P39904 YBR206WYBR206W 324 nt1.32□□□□□ -2.2
VPS52P39904 NPR2YEL062W 1848 nt1.31□□□□□ -2.2
VPS52P39904 YDL206WYDL206W 2289 nt1.31□□□□□ -2.2
VPS52P39904 YMR046W-AYMR046W-A 129 nt1.31□□□□□ -2.2
VPS52P39904 SGF11YPL047W 300 nt1.31□□□□□ -2.2
VPS52P39904 PIP2YOR363C 2991 nt1.3□□□□□ -2.2
VPS52P39904 snR74snR74 88 nt1.3□□□□□ -2.2
VPS52P39904 tQ(UUG)E2tQ(UUG)E2 72 nt1.3□□□□□ -2.2
VPS52P39904 YOR072W-BYOR072W-B 162 nt1.3□□□□□ -2.2
VPS52P39904 snR14snR14 160 nt1.3□□□□□ -2.2
VPS52P39904 PAN2YGL094C 3348 nt1.3□□□□□ -2.2
VPS52P39904 PIK1YNL267W 3201 nt1.29□□□□□ -2.2
VPS52P39904 YOR161W-BYOR161W-B 261 nt1.29□□□□□ -2.2
VPS52P39904 YBR182C-AYBR182C-A 195 nt1.29□□□□□ -2.2
VPS52P39904 YIR030W-AYIR030W-A 384 nt1.28□□□□□ -2.2
VPS52P39904 AHC1YOR023C 1701 nt1.28□□□□□ -2.2
VPS52P39904 YKU70YMR284W 1809 nt1.28□□□□□ -2.2
VPS52P39904 FIG4YNL325C 2640 nt1.27□□□□□ -2.21
VPS52P39904 SLD3YGL113W 2007 nt1.27□□□□□ -2.21
VPS52P39904 YDR406W-AYDR406W-A 246 nt1.27□□□□□ -2.21
VPS52P39904 YOR302WYOR302W 78 nt1.27□□□□□ -2.21
VPS52P39904 SEC21YNL287W 2808 nt1.27□□□□□ -2.21
VPS52P39904 YGR130CYGR130C 2451 nt1.27□□□□□ -2.21
VPS52P39904 tH(GUG)E1tH(GUG)E1 72 nt1.26□□□□□ -2.21
VPS52P39904 tH(GUG)E2tH(GUG)E2 72 nt1.26□□□□□ -2.21
VPS52P39904 tH(GUG)G1tH(GUG)G1 72 nt1.26□□□□□ -2.21
VPS52P39904 tH(GUG)G2tH(GUG)G2 72 nt1.26□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms