Protein–RNA interactions for Protein: P38170

BRN1, Condensin complex subunit 2, yeastyeast

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRN1P38170 VPS55YJR044C 423 nt2.07□□□□□ -2.08
BRN1P38170 COF1YLL050C 432 nt2.07□□□□□ -2.08
BRN1P38170 YMR321CYMR321C 318 nt2.07□□□□□ -2.08
BRN1P38170 YOR302WYOR302W 78 nt2.07□□□□□ -2.08
BRN1P38170 MPT5YGL178W 2580 nt2.06□□□□□ -2.08
BRN1P38170 DNF3YMR162C 4971 nt2.06□□□□□ -2.08
BRN1P38170 ALK1YGL021W 2283 nt2.06□□□□□ -2.08
BRN1P38170 SPT21YMR179W 2277 nt2.06□□□□□ -2.08
BRN1P38170 YDR182W-AYDR182W-A 204 nt2.06□□□□□ -2.08
BRN1P38170 YJL022WYJL022W 309 nt2.06□□□□□ -2.08
BRN1P38170 PFD1YJL179W 330 nt2.06□□□□□ -2.08
BRN1P38170 TRM3YDL112W 4311 nt2.05□□□□□ -2.08
BRN1P38170 YMR175W-AYMR175W-A 195 nt2.05□□□□□ -2.08
BRN1P38170 YOR161W-BYOR161W-B 261 nt2.05□□□□□ -2.08
BRN1P38170 NIP100YPL174C 2607 nt2.05□□□□□ -2.08
BRN1P38170 GCN2YDR283C 4980 nt2.05□□□□□ -2.08
BRN1P38170 tF(GAA)QtF(GAA)Q 75 nt2.04□□□□□ -2.08
BRN1P38170 YOR376WYOR376W 369 nt2.03□□□□□ -2.08
BRN1P38170 VPS54YDR027C 2670 nt2.03□□□□□ -2.09
BRN1P38170 PDE2YOR360C 1581 nt2.02□□□□□ -2.09
BRN1P38170 MAD1YGL086W 2250 nt2.02□□□□□ -2.09
BRN1P38170 ALY2YJL084C 3141 nt2.01□□□□□ -2.09
BRN1P38170 YIR044CYIR044C 186 nt2.01□□□□□ -2.09
BRN1P38170 SPC98YNL126W 2541 nt2.01□□□□□ -2.09
BRN1P38170 CFT1YDR301W 4074 nt2.01□□□□□ -2.09
BRN1P38170 SBE22YHR103W 2559 nt2.01□□□□□ -2.09
BRN1P38170 SEC5YDR166C 2916 nt2□□□□□ -2.09
BRN1P38170 YLR140WYLR140W 327 nt2□□□□□ -2.09
BRN1P38170 AI5_ALPHAQ0070 1893 nt2□□□□□ -2.09
BRN1P38170 RAD50YNL250W 3939 nt1.99□□□□□ -2.09
BRN1P38170 MON2YNL297C 4911 nt1.99□□□□□ -2.09
BRN1P38170 MSN5YDR335W 3675 nt1.99□□□□□ -2.09
BRN1P38170 YLR422WYLR422W 5799 nt1.99□□□□□ -2.09
BRN1P38170 YLR294CYLR294C 330 nt1.99□□□□□ -2.09
BRN1P38170 YOR093CYOR093C 4947 nt1.99□□□□□ -2.09
BRN1P38170 YLL054CYLL054C 2532 nt1.98□□□□□ -2.09
BRN1P38170 ISD11YER048W-A 285 nt1.98□□□□□ -2.09
BRN1P38170 YGL217CYGL217C 342 nt1.98□□□□□ -2.09
BRN1P38170 RAD34YDR314C 2079 nt1.98□□□□□ -2.09
BRN1P38170 YOR011W-AYOR011W-A 207 nt1.97□□□□□ -2.09
BRN1P38170 YPR092WYPR092W 306 nt1.97□□□□□ -2.09
BRN1P38170 ROM2YLR371W 4071 nt1.96□□□□□ -2.09
BRN1P38170 EST2YLR318W 2655 nt1.96□□□□□ -2.1
BRN1P38170 YGR109W-BYGR109W-B 4644 nt1.96□□□□□ -2.1
BRN1P38170 SLI15YBR156C 2097 nt1.96□□□□□ -2.1
BRN1P38170 NUP192YJL039C 5052 nt1.96□□□□□ -2.1
BRN1P38170 SLX4YLR135W 2247 nt1.95□□□□□ -2.1
BRN1P38170 snR74snR74 88 nt1.95□□□□□ -2.1
BRN1P38170 YDL185C-AYDL185C-A 228 nt1.95□□□□□ -2.1
BRN1P38170 SPO75YLL005C 2607 nt1.95□□□□□ -2.1
BRN1P38170 YMR045CYMR045C 5268 nt1.95□□□□□ -2.1
BRN1P38170 SXM1YDR395W 2835 nt1.94□□□□□ -2.1
BRN1P38170 YJL182CYJL182C 318 nt1.94□□□□□ -2.1
BRN1P38170 YLR466C-BYLR466C-B 117 nt1.94□□□□□ -2.1
BRN1P38170 COA6YMR244C-A 315 nt1.94□□□□□ -2.1
BRN1P38170 RRT15YLR162W-A 189 nt1.93□□□□□ -2.1
BRN1P38170 SMC4YLR086W 4257 nt1.93□□□□□ -2.1
BRN1P38170 RPS27BYHR021C 249 nt1.92□□□□□ -2.1
BRN1P38170 SWI4YER111C 3282 nt1.91□□□□□ -2.1
BRN1P38170 RPL34BYIL052C 366 nt1.91□□□□□ -2.1
BRN1P38170 SPO21YOL091W 1830 nt1.9□□□□□ -2.11
BRN1P38170 YGR151CYGR151C 336 nt1.9□□□□□ -2.11
BRN1P38170 YOR218CYOR218C 420 nt1.9□□□□□ -2.11
BRN1P38170 IFH1YLR223C 3258 nt1.9□□□□□ -2.11
BRN1P38170 CHS1YNL192W 3396 nt1.9□□□□□ -2.11
BRN1P38170 SPC110YDR356W 2835 nt1.9□□□□□ -2.11
BRN1P38170 CUL3YGR003W 2235 nt1.89□□□□□ -2.11
BRN1P38170 OLI1Q0130 231 nt1.89□□□□□ -2.11
BRN1P38170 SGF11YPL047W 300 nt1.89□□□□□ -2.11
BRN1P38170 YBR182C-AYBR182C-A 195 nt1.89□□□□□ -2.11
BRN1P38170 AIM44YPL158C 2277 nt1.89□□□□□ -2.11
BRN1P38170 COG4YPR105C 2586 nt1.89□□□□□ -2.11
BRN1P38170 BRR2YER172C 6492 nt1.89□□□□□ -2.11
BRN1P38170 IRA1YBR140C 9279 nt1.89□□□□□ -2.11
BRN1P38170 MEC1YBR136W 7107 nt1.88□□□□□ -2.11
BRN1P38170 AZF1YOR113W 2745 nt1.88□□□□□ -2.11
BRN1P38170 ANS1YHR126C 480 nt1.88□□□□□ -2.11
BRN1P38170 YIR030W-AYIR030W-A 384 nt1.88□□□□□ -2.11
BRN1P38170 YJL120WYJL120W 324 nt1.88□□□□□ -2.11
BRN1P38170 PAN2YGL094C 3348 nt1.88□□□□□ -2.11
BRN1P38170 BPH1YCR032W 6504 nt1.87□□□□□ -2.11
BRN1P38170 YJL150WYJL150W 303 nt1.87□□□□□ -2.11
BRN1P38170 YKU70YMR284W 1809 nt1.87□□□□□ -2.11
BRN1P38170 MMS4YBR098W 2076 nt1.86□□□□□ -2.11
BRN1P38170 RPS25BYLR333C 327 nt1.86□□□□□ -2.11
BRN1P38170 YBL008W-AYBL008W-A 240 nt1.86□□□□□ -2.11
BRN1P38170 YNL097C-BYNL097C-B 123 nt1.86□□□□□ -2.11
BRN1P38170 PIP2YOR363C 2991 nt1.86□□□□□ -2.11
BRN1P38170 PTP2YOR208W 2253 nt1.86□□□□□ -2.11
BRN1P38170 POL5YEL055C 3069 nt1.85□□□□□ -2.11
BRN1P38170 YLR419WYLR419W 4308 nt1.85□□□□□ -2.11
BRN1P38170 YEL014CYEL014C 306 nt1.85□□□□□ -2.11
BRN1P38170 IRC20YLR247C 4671 nt1.85□□□□□ -2.11
BRN1P38170 NUP145YGL092W 3954 nt1.84□□□□□ -2.11
BRN1P38170 TRM732YMR259C 4263 nt1.84□□□□□ -2.11
BRN1P38170 PMD1YER132C 5262 nt1.84□□□□□ -2.11
BRN1P38170 YBR131C-AYBR131C-A 90 nt1.84□□□□□ -2.11
BRN1P38170 SEC3YER008C 4011 nt1.83□□□□□ -2.12
BRN1P38170 CDC25YLR310C 4770 nt1.83□□□□□ -2.12
BRN1P38170 YBR174CYBR174C 315 nt1.83□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 51.2 ms