Protein–RNA interactions for Protein: P36100

TFA1, Transcription initiation factor IIE subunit alpha, yeastyeast

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TFA1P36100 YLL066W-BYLL066W-B 171 nt3.98□□□□□ -1.77
TFA1P36100 CHC1YGL206C 4962 nt3.98□□□□□ -1.77
TFA1P36100 TOM1YDR457W 9807 nt3.98□□□□□ -1.77
TFA1P36100 SIR4YDR227W 4077 nt3.98□□□□□ -1.77
TFA1P36100 SNQ2YDR011W 4506 nt3.98□□□□□ -1.77
TFA1P36100 SFB2YNL049C 2631 nt3.97□□□□□ -1.77
TFA1P36100 RCO1YMR075W 2055 nt3.96□□□□□ -1.78
TFA1P36100 SEC63YOR254C 1992 nt3.95□□□□□ -1.78
TFA1P36100 LHS1YKL073W 2646 nt3.95□□□□□ -1.78
TFA1P36100 MSH6YDR097C 3729 nt3.95□□□□□ -1.78
TFA1P36100 SLH1YGR271W 5904 nt3.94□□□□□ -1.78
TFA1P36100 YIL169CYIL169C 2988 nt3.93□□□□□ -1.78
TFA1P36100 HER1YOR227W 3741 nt3.93□□□□□ -1.78
TFA1P36100 MDS3YGL197W 4464 nt3.93□□□□□ -1.78
TFA1P36100 snR45snR45 172 nt3.92□□□□□ -1.78
TFA1P36100 SEC7YDR170C 6030 nt3.92□□□□□ -1.78
TFA1P36100 SEC26YDR238C 2922 nt3.91□□□□□ -1.78
TFA1P36100 YGL063C-AYGL063C-A 150 nt3.91□□□□□ -1.78
TFA1P36100 YOR343W-BYOR343W-B 5313 nt3.91□□□□□ -1.78
TFA1P36100 YPL150WYPL150W 2706 nt3.91□□□□□ -1.78
TFA1P36100 MOT1YPL082C 5604 nt3.91□□□□□ -1.78
TFA1P36100 YAL067W-AYAL067W-A 228 nt3.9□□□□□ -1.79
TFA1P36100 YOR296WYOR296W 3870 nt3.89□□□□□ -1.79
TFA1P36100 UTP21YLR409C 2820 nt3.89□□□□□ -1.79
TFA1P36100 HSL1YKL101W 4557 nt3.89□□□□□ -1.79
TFA1P36100 YHR131W-AYHR131W-A 246 nt3.88□□□□□ -1.79
TFA1P36100 YJR039WYJR039W 3366 nt3.88□□□□□ -1.79
TFA1P36100 HIR3YJR140C 4947 nt3.88□□□□□ -1.79
TFA1P36100 MSB2YGR014W 3921 nt3.88□□□□□ -1.79
TFA1P36100 UTP8YGR128C 2142 nt3.87□□□□□ -1.79
TFA1P36100 tQ(UUG)BtQ(UUG)B 72 nt3.87□□□□□ -1.79
TFA1P36100 SPO24YPR036W-A 204 nt3.87□□□□□ -1.79
TFA1P36100 snR39BsnR39B 96 nt3.87□□□□□ -1.79
TFA1P36100 YEF3YLR249W 3135 nt3.86□□□□□ -1.79
TFA1P36100 QCR9YGR183C 201 nt3.86□□□□□ -1.79
TFA1P36100 YKL100W-AYKL100W-A 90 nt3.86□□□□□ -1.79
TFA1P36100 NUT1YGL151W 3399 nt3.85□□□□□ -1.79
TFA1P36100 YLL020CYLL020C 306 nt3.85□□□□□ -1.79
TFA1P36100 UFD2YDL190C 2886 nt3.84□□□□□ -1.79
TFA1P36100 YBL039C-AYBL039C-A 84 nt3.84□□□□□ -1.79
TFA1P36100 PMR1YGL167C 2853 nt3.84□□□□□ -1.8
TFA1P36100 YPL216WYPL216W 3309 nt3.83□□□□□ -1.8
TFA1P36100 BFR2YDR299W 1605 nt3.83□□□□□ -1.8
TFA1P36100 RSM22YKL155C 1887 nt3.83□□□□□ -1.8
TFA1P36100 POL5YEL055C 3069 nt3.82□□□□□ -1.8
TFA1P36100 tF(GAA)DtF(GAA)D 73 nt3.81□□□□□ -1.8
TFA1P36100 tF(GAA)NtF(GAA)N 73 nt3.81□□□□□ -1.8
TFA1P36100 SRB8YCR081W 4284 nt3.81□□□□□ -1.8
TFA1P36100 PAN2YGL094C 3348 nt3.8□□□□□ -1.8
TFA1P36100 RGC1YPR115W 3252 nt3.8□□□□□ -1.8
TFA1P36100 EAF1YDR359C 2949 nt3.8□□□□□ -1.8
TFA1P36100 YGL123C-AYGL123C-A 231 nt3.8□□□□□ -1.8
TFA1P36100 ALY2YJL084C 3141 nt3.8□□□□□ -1.8
TFA1P36100 YER172C-AYER172C-A 381 nt3.78□□□□□ -1.8
TFA1P36100 TBS1YBR150C 3285 nt3.77□□□□□ -1.81
TFA1P36100 YBL005W-BYBL005W-B 5268 nt3.77□□□□□ -1.81
TFA1P36100 PAU10YDR542W 363 nt3.77□□□□□ -1.81
TFA1P36100 PAU11YGL261C 363 nt3.77□□□□□ -1.81
TFA1P36100 PAU4YLR461W 363 nt3.77□□□□□ -1.81
TFA1P36100 SLN1YIL147C 3663 nt3.77□□□□□ -1.81
TFA1P36100 BPT1YLL015W 4680 nt3.76□□□□□ -1.81
TFA1P36100 snR81snR81 201 nt3.76□□□□□ -1.81
TFA1P36100 ECM29YHL030W 5607 nt3.76□□□□□ -1.81
TFA1P36100 TOF1YNL273W 3717 nt3.75□□□□□ -1.81
TFA1P36100 PNC1YGL037C 651 nt3.75□□□□□ -1.81
TFA1P36100 EMC5YIL027C 426 nt3.75□□□□□ -1.81
TFA1P36100 MMS4YBR098W 2076 nt3.74□□□□□ -1.81
TFA1P36100 YDR098C-BYDR098C-B 5268 nt3.74□□□□□ -1.81
TFA1P36100 YDR210C-DYDR210C-D 5268 nt3.74□□□□□ -1.81
TFA1P36100 YDR316W-BYDR316W-B 5268 nt3.74□□□□□ -1.81
TFA1P36100 YDR365W-BYDR365W-B 5268 nt3.74□□□□□ -1.81
TFA1P36100 YER138CYER138C 5268 nt3.74□□□□□ -1.81
TFA1P36100 YER160CYER160C 5268 nt3.74□□□□□ -1.81
TFA1P36100 YGR038C-BYGR038C-B 5268 nt3.74□□□□□ -1.81
TFA1P36100 YGR161C-DYGR161C-D 5268 nt3.74□□□□□ -1.81
TFA1P36100 YJR027WYJR027W 5268 nt3.74□□□□□ -1.81
TFA1P36100 YLR157C-BYLR157C-B 5268 nt3.74□□□□□ -1.81
TFA1P36100 YML039WYML039W 5268 nt3.74□□□□□ -1.81
TFA1P36100 YML045WYML045W 5268 nt3.74□□□□□ -1.81
TFA1P36100 YMR050CYMR050C 5268 nt3.74□□□□□ -1.81
TFA1P36100 YOL103W-BYOL103W-B 5268 nt3.74□□□□□ -1.81
TFA1P36100 YBR012W-BYBR012W-B 5271 nt3.74□□□□□ -1.81
TFA1P36100 YOR142W-BYOR142W-B 5268 nt3.74□□□□□ -1.81
TFA1P36100 YPL257W-BYPL257W-B 5268 nt3.74□□□□□ -1.81
TFA1P36100 YPR158W-BYPR158W-B 5271 nt3.74□□□□□ -1.81
TFA1P36100 YPP1YGR198W 2454 nt3.73□□□□□ -1.81
TFA1P36100 COG6YNL041C 2520 nt3.72□□□□□ -1.81
TFA1P36100 YDR209CYDR209C 414 nt3.72□□□□□ -1.81
TFA1P36100 ESL1YIL151C 3357 nt3.71□□□□□ -1.81
TFA1P36100 TCB2YNL087W 3537 nt3.71□□□□□ -1.82
TFA1P36100 COX5BYIL111W 456 nt3.69□□□□□ -1.82
TFA1P36100 YOR161W-AYOR161W-A 81 nt3.69□□□□□ -1.82
TFA1P36100 MYO4YAL029C 4416 nt3.69□□□□□ -1.82
TFA1P36100 SPF1YEL031W 3648 nt3.69□□□□□ -1.82
TFA1P36100 KIP1YBL063W 3336 nt3.68□□□□□ -1.82
TFA1P36100 RAD50YNL250W 3939 nt3.68□□□□□ -1.82
TFA1P36100 YHR086W-AYHR086W-A 162 nt3.68□□□□□ -1.82
TFA1P36100 KOG1YHR186C 4674 nt3.67□□□□□ -1.82
TFA1P36100 YIL082W-AYIL082W-A 4497 nt3.66□□□□□ -1.82
TFA1P36100 COA6YMR244C-A 315 nt3.66□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 87.5 ms