Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL158047.1-201ENST00000445918 881 ntBASIC20.65■□□□□ 0.9
SLC6A4P31645 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.65■□□□□ 0.9
SLC6A4P31645 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.65■□□□□ 0.9
SLC6A4P31645 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A4P31645 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A4P31645 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A4P31645 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A4P31645 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A4P31645 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A4P31645 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A4P31645 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A4P31645 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC6A4P31645 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC6A4P31645 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC6A4P31645 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A4P31645 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC6A4P31645 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A4P31645 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC6A4P31645 MTDHP1-201ENST00000605323 784 ntBASIC20.64■□□□□ 0.89
SLC6A4P31645 AL359736.2-201ENST00000621992 437 ntBASIC20.64■□□□□ 0.89
SLC6A4P31645 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
SLC6A4P31645 AC066615.1-201ENST00000640911 628 ntBASIC20.64■□□□□ 0.89
SLC6A4P31645 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A4P31645 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A4P31645 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A4P31645 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC6A4P31645 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A4P31645 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A4P31645 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A4P31645 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A4P31645 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC6A4P31645 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A4P31645 AC020907.5-201ENST00000624372 1936 ntBASIC20.63■□□□□ 0.89
SLC6A4P31645 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A4P31645 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SLC6A4P31645 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A4P31645 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC6A4P31645 HLA-G-202ENST00000376815 851 ntBASIC20.63■□□□□ 0.89
SLC6A4P31645 HLA-G-203ENST00000376818 1127 ntBASIC20.63■□□□□ 0.89
SLC6A4P31645 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC6A4P31645 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SLC6A4P31645 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A4P31645 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC6A4P31645 C1QBPP2-201ENST00000528754 825 ntBASIC20.63■□□□□ 0.89
SLC6A4P31645 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC6A4P31645 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A4P31645 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC6A4P31645 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A4P31645 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A4P31645 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC6A4P31645 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC6A4P31645 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A4P31645 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
SLC6A4P31645 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A4P31645 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A4P31645 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A4P31645 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A4P31645 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A4P31645 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A4P31645 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.62■□□□□ 0.89
SLC6A4P31645 RPPH1-201ENST00000516869 333 ntBASIC20.62■□□□□ 0.89
SLC6A4P31645 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC6A4P31645 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SLC6A4P31645 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A4P31645 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A4P31645 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SLC6A4P31645 AP005212.1-201ENST00000581547 1997 ntBASIC20.61■□□□□ 0.89
SLC6A4P31645 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A4P31645 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A4P31645 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A4P31645 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A4P31645 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.61■□□□□ 0.89
SLC6A4P31645 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A4P31645 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A4P31645 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC6A4P31645 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
SLC6A4P31645 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC6A4P31645 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A4P31645 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A4P31645 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A4P31645 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A4P31645 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A4P31645 FEM1AP1-201ENST00000431297 1995 ntBASIC20.61■□□□□ 0.89
SLC6A4P31645 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A4P31645 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A4P31645 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC6A4P31645 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A4P31645 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A4P31645 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A4P31645 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.6■□□□□ 0.89
SLC6A4P31645 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A4P31645 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.6■□□□□ 0.89
SLC6A4P31645 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC6A4P31645 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A4P31645 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.6■□□□□ 0.89
SLC6A4P31645 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SLC6A4P31645 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A4P31645 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A4P31645 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A4P31645 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms