Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.38■□□□□ 0.53
SHC1P29353 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHC1P29353 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.38■□□□□ 0.53
SHC1P29353 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.38■□□□□ 0.53
SHC1P29353 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.38■□□□□ 0.53
SHC1P29353 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.38■□□□□ 0.53
SHC1P29353 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHC1P29353 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHC1P29353 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHC1P29353 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHC1P29353 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.38■□□□□ 0.53
SHC1P29353 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SHC1P29353 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
SHC1P29353 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHC1P29353 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHC1P29353 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHC1P29353 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHC1P29353 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SHC1P29353 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHC1P29353 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHC1P29353 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SHC1P29353 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SHC1P29353 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
SHC1P29353 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHC1P29353 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.37■□□□□ 0.53
SHC1P29353 KRT18P68-201ENST00000392293 1000 ntBASIC18.37■□□□□ 0.53
SHC1P29353 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHC1P29353 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.37■□□□□ 0.53
SHC1P29353 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.37■□□□□ 0.53
SHC1P29353 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
SHC1P29353 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.37■□□□□ 0.53
SHC1P29353 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHC1P29353 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHC1P29353 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHC1P29353 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.37■□□□□ 0.53
SHC1P29353 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
SHC1P29353 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHC1P29353 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHC1P29353 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.37■□□□□ 0.53
SHC1P29353 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHC1P29353 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHC1P29353 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHC1P29353 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.37■□□□□ 0.53
SHC1P29353 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.37■□□□□ 0.53
SHC1P29353 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.36■□□□□ 0.53
SHC1P29353 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHC1P29353 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHC1P29353 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHC1P29353 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SHC1P29353 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHC1P29353 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
SHC1P29353 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.36■□□□□ 0.53
SHC1P29353 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.36■□□□□ 0.53
SHC1P29353 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SHC1P29353 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHC1P29353 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHC1P29353 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.36■□□□□ 0.53
SHC1P29353 AL356652.1-201ENST00000615962 565 ntBASIC18.36■□□□□ 0.53
SHC1P29353 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHC1P29353 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHC1P29353 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHC1P29353 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHC1P29353 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.35■□□□□ 0.53
SHC1P29353 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC1P29353 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC1P29353 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC1P29353 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SHC1P29353 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC1P29353 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC1P29353 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.35■□□□□ 0.53
SHC1P29353 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC1P29353 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC1P29353 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHC1P29353 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.35■□□□□ 0.53
SHC1P29353 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.35■□□□□ 0.53
SHC1P29353 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.35■□□□□ 0.53
SHC1P29353 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.35■□□□□ 0.53
SHC1P29353 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.35■□□□□ 0.53
SHC1P29353 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.35■□□□□ 0.53
SHC1P29353 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC1P29353 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC1P29353 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC1P29353 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.34■□□□□ 0.53
SHC1P29353 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC1P29353 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC1P29353 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC1P29353 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHC1P29353 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.34■□□□□ 0.53
SHC1P29353 LSM12P1-201ENST00000411836 588 ntBASIC18.34■□□□□ 0.53
SHC1P29353 AC142086.2-201ENST00000569753 217 ntBASIC18.34■□□□□ 0.53
SHC1P29353 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SHC1P29353 AC105020.6-201ENST00000621523 1217 ntBASIC18.34■□□□□ 0.53
SHC1P29353 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC1P29353 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHC1P29353 AC112907.3-201ENST00000577781 2400 ntBASIC18.34■□□□□ 0.53
SHC1P29353 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHC1P29353 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC1P29353 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHC1P29353 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.33■□□□□ 0.53
SHC1P29353 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms