Protein–RNA interactions for Protein: P29056

BRF1, Transcription factor IIIB 70 kDa subunit, yeastyeast

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRF1P29056 tW(UCA)QtW(UCA)Q 74 nt1.24□□□□□ -2.21
BRF1P29056 YBR012CYBR012C 420 nt1.24□□□□□ -2.21
BRF1P29056 IFH1YLR223C 3258 nt1.23□□□□□ -2.21
BRF1P29056 BUD3YCL014W 4911 nt1.23□□□□□ -2.21
BRF1P29056 AIM44YPL158C 2277 nt1.23□□□□□ -2.21
BRF1P29056 SET3YKR029C 2256 nt1.22□□□□□ -2.21
BRF1P29056 EAF1YDR359C 2949 nt1.22□□□□□ -2.21
BRF1P29056 YHL046W-AYHL046W-A 327 nt1.22□□□□□ -2.21
BRF1P29056 MAM33YIL070C 801 nt1.22□□□□□ -2.21
BRF1P29056 YIR044CYIR044C 186 nt1.22□□□□□ -2.21
BRF1P29056 RPL33BYOR234C 324 nt1.22□□□□□ -2.21
BRF1P29056 MMS4YBR098W 2076 nt1.21□□□□□ -2.22
BRF1P29056 SLD3YGL113W 2007 nt1.21□□□□□ -2.22
BRF1P29056 STB6YKL072W 2301 nt1.21□□□□□ -2.22
BRF1P29056 VAM6YDL077C 3150 nt1.2□□□□□ -2.22
BRF1P29056 PAN2YGL094C 3348 nt1.2□□□□□ -2.22
BRF1P29056 YBR221W-AYBR221W-A 105 nt1.2□□□□□ -2.22
BRF1P29056 CDC39YCR093W 6327 nt1.2□□□□□ -2.22
BRF1P29056 RPL35AYDL191W 363 nt1.19□□□□□ -2.22
BRF1P29056 RPL34BYIL052C 366 nt1.19□□□□□ -2.22
BRF1P29056 SPO75YLL005C 2607 nt1.19□□□□□ -2.22
BRF1P29056 RPS30BYOR182C 192 nt1.19□□□□□ -2.22
BRF1P29056 YPR016W-AYPR016W-A 261 nt1.19□□□□□ -2.22
BRF1P29056 FIG4YNL325C 2640 nt1.18□□□□□ -2.22
BRF1P29056 GPG1YGL121C 381 nt1.18□□□□□ -2.22
BRF1P29056 YHR007C-AYHR007C-A 216 nt1.18□□□□□ -2.22
BRF1P29056 PDE2YOR360C 1581 nt1.17□□□□□ -2.22
BRF1P29056 PKH2YOL100W 3246 nt1.17□□□□□ -2.22
BRF1P29056 snR56snR56 88 nt1.17□□□□□ -2.22
BRF1P29056 YJR011CYJR011C 786 nt1.17□□□□□ -2.22
BRF1P29056 HTB2YBL002W 396 nt1.17□□□□□ -2.22
BRF1P29056 SIP4YJL089W 2490 nt1.17□□□□□ -2.22
BRF1P29056 CUL3YGR003W 2235 nt1.17□□□□□ -2.22
BRF1P29056 STO1YMR125W 2586 nt1.17□□□□□ -2.22
BRF1P29056 GIM4YEL003W 336 nt1.16□□□□□ -2.22
BRF1P29056 YBL008W-AYBL008W-A 240 nt1.16□□□□□ -2.22
BRF1P29056 YPR197CYPR197C 564 nt1.16□□□□□ -2.22
BRF1P29056 YDL206WYDL206W 2289 nt1.15□□□□□ -2.22
BRF1P29056 NUP157YER105C 4176 nt1.15□□□□□ -2.22
BRF1P29056 YBR200W-AYBR200W-A 165 nt1.15□□□□□ -2.23
BRF1P29056 YJR029WYJR029W 5268 nt1.14□□□□□ -2.23
BRF1P29056 YPR137C-BYPR137C-B 5268 nt1.14□□□□□ -2.23
BRF1P29056 INA22YIR024C 651 nt1.14□□□□□ -2.23
BRF1P29056 YLL007CYLL007C 1998 nt1.14□□□□□ -2.23
BRF1P29056 KAP120YPL125W 3099 nt1.14□□□□□ -2.23
BRF1P29056 YAR009CYAR009C 3591 nt1.13□□□□□ -2.23
BRF1P29056 EMT1tM(CAU)D 73 nt1.13□□□□□ -2.23
BRF1P29056 EMT5tM(CAU)J1 73 nt1.13□□□□□ -2.23
BRF1P29056 EMT3tM(CAU)J2 73 nt1.13□□□□□ -2.23
BRF1P29056 EMT4tM(CAU)M 73 nt1.13□□□□□ -2.23
BRF1P29056 EMT2tM(CAU)O2 73 nt1.13□□□□□ -2.23
BRF1P29056 YHR175W-AYHR175W-A 150 nt1.13□□□□□ -2.23
BRF1P29056 YAR029WYAR029W 225 nt1.13□□□□□ -2.23
BRF1P29056 OST1YJL002C 1431 nt1.13□□□□□ -2.23
BRF1P29056 YDR521WYDR521W 336 nt1.12□□□□□ -2.23
BRF1P29056 tR(ACG)Q2tR(ACG)Q2 74 nt1.12□□□□□ -2.23
BRF1P29056 TAR1YLR154W-C 375 nt1.12□□□□□ -2.23
BRF1P29056 SCC2YDR180W 4482 nt1.12□□□□□ -2.23
BRF1P29056 PTP2YOR208W 2253 nt1.12□□□□□ -2.23
BRF1P29056 YHL042WYHL042W 453 nt1.11□□□□□ -2.23
BRF1P29056 PAM16YJL104W 450 nt1.11□□□□□ -2.23
BRF1P29056 YAF9YNL107W 681 nt1.11□□□□□ -2.23
BRF1P29056 QCR9YGR183C 201 nt1.1□□□□□ -2.23
BRF1P29056 SPT7YBR081C 3999 nt1.1□□□□□ -2.23
BRF1P29056 YCK3YER123W 1575 nt1.09□□□□□ -2.23
BRF1P29056 YDR102CYDR102C 333 nt1.08□□□□□ -2.24
BRF1P29056 tF(GAA)BtF(GAA)B 73 nt1.08□□□□□ -2.24
BRF1P29056 tF(GAA)FtF(GAA)F 73 nt1.08□□□□□ -2.24
BRF1P29056 tF(GAA)GtF(GAA)G 73 nt1.08□□□□□ -2.24
BRF1P29056 tF(GAA)H1tF(GAA)H1 73 nt1.08□□□□□ -2.24
BRF1P29056 tF(GAA)H2tF(GAA)H2 73 nt1.08□□□□□ -2.24
BRF1P29056 tF(GAA)MtF(GAA)M 73 nt1.08□□□□□ -2.24
BRF1P29056 tF(GAA)P1tF(GAA)P1 73 nt1.08□□□□□ -2.24
BRF1P29056 tF(GAA)P2tF(GAA)P2 73 nt1.08□□□□□ -2.24
BRF1P29056 YPL038W-AYPL038W-A 192 nt1.08□□□□□ -2.24
BRF1P29056 YBR206WYBR206W 324 nt1.08□□□□□ -2.24
BRF1P29056 YDR048CYDR048C 315 nt1.07□□□□□ -2.24
BRF1P29056 YPL225WYPL225W 441 nt1.07□□□□□ -2.24
BRF1P29056 WAR1YML076C 2835 nt1.07□□□□□ -2.24
BRF1P29056 HMRA2YCR096C 360 nt1.06□□□□□ -2.24
BRF1P29056 YDL240C-AYDL240C-A 138 nt1.06□□□□□ -2.24
BRF1P29056 UBP3YER151C 2739 nt1.04□□□□□ -2.24
BRF1P29056 DOP1YDR141C 5097 nt1.03□□□□□ -2.24
BRF1P29056 ATP6Q0085 780 nt1.03□□□□□ -2.24
BRF1P29056 YJL120WYJL120W 324 nt1.03□□□□□ -2.24
BRF1P29056 YBR064WYBR064W 429 nt1.03□□□□□ -2.24
BRF1P29056 RPS25BYLR333C 327 nt1.02□□□□□ -2.25
BRF1P29056 YDR183C-AYDR183C-A 258 nt1.01□□□□□ -2.25
BRF1P29056 BEM2YER155C 6504 nt1□□□□□ -2.25
BRF1P29056 SSS1YDR086C 243 nt1□□□□□ -2.25
BRF1P29056 GEA2YEL022W 4380 nt0.99□□□□□ -2.25
BRF1P29056 HTL1YCR020W-B 237 nt0.99□□□□□ -2.25
BRF1P29056 YDL073WYDL073W 2955 nt0.99□□□□□ -2.25
BRF1P29056 SMC1YFL008W 3678 nt0.99□□□□□ -2.25
BRF1P29056 SPO21YOL091W 1830 nt0.99□□□□□ -2.25
BRF1P29056 PRP16YKR086W 3216 nt0.98□□□□□ -2.25
BRF1P29056 YDL196WYDL196W 330 nt0.98□□□□□ -2.25
BRF1P29056 ISD11YER048W-A 285 nt0.98□□□□□ -2.25
BRF1P29056 YDR344CYDR344C 444 nt0.97□□□□□ -2.25
BRF1P29056 YIL115W-AYIL115W-A 372 nt0.97□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 103.5 ms