Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RXRBP28702 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RXRBP28702 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RXRBP28702 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RXRBP28702 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC26.63■■□□□ 1.85
RXRBP28702 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC26.63■■□□□ 1.85
RXRBP28702 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.63■■□□□ 1.85
RXRBP28702 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RXRBP28702 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC26.62■■□□□ 1.85
RXRBP28702 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC26.62■■□□□ 1.85
RXRBP28702 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RXRBP28702 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RXRBP28702 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
RXRBP28702 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RXRBP28702 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC26.62■■□□□ 1.85
RXRBP28702 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC26.62■■□□□ 1.85
RXRBP28702 AL441883.1-201ENST00000566170 1045 ntBASIC26.62■■□□□ 1.85
RXRBP28702 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC26.62■■□□□ 1.85
RXRBP28702 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC26.62■■□□□ 1.85
RXRBP28702 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC26.62■■□□□ 1.85
RXRBP28702 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RXRBP28702 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.62■■□□□ 1.85
RXRBP28702 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.61■■□□□ 1.85
RXRBP28702 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RXRBP28702 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC26.61■■□□□ 1.85
RXRBP28702 AC007663.1-201ENST00000438948 1240 ntBASIC26.61■■□□□ 1.85
RXRBP28702 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC26.61■■□□□ 1.85
RXRBP28702 AC009078.2-202ENST00000463353 338 ntBASIC26.61■■□□□ 1.85
RXRBP28702 UNC93B7-201ENST00000509439 705 ntBASIC26.61■■□□□ 1.85
RXRBP28702 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RXRBP28702 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC26.61■■□□□ 1.85
RXRBP28702 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RXRBP28702 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RXRBP28702 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC26.61■■□□□ 1.85
RXRBP28702 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RXRBP28702 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
RXRBP28702 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
RXRBP28702 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC26.6■■□□□ 1.85
RXRBP28702 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC26.6■■□□□ 1.85
RXRBP28702 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RXRBP28702 KRT18P38-201ENST00000449496 1282 ntBASIC26.6■■□□□ 1.85
RXRBP28702 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC26.6■■□□□ 1.85
RXRBP28702 AC008622.2-201ENST00000617006 1229 ntBASIC26.6■■□□□ 1.85
RXRBP28702 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.6■■□□□ 1.85
RXRBP28702 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RXRBP28702 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
RXRBP28702 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
RXRBP28702 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC26.6■■□□□ 1.85
RXRBP28702 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RXRBP28702 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
RXRBP28702 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RXRBP28702 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RXRBP28702 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RXRBP28702 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC26.59■■□□□ 1.85
RXRBP28702 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RXRBP28702 SLC25A1P2-201ENST00000430693 912 ntBASIC26.59■■□□□ 1.85
RXRBP28702 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
RXRBP28702 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RXRBP28702 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
RXRBP28702 AC092119.3-201ENST00000612618 583 ntBASIC26.59■■□□□ 1.85
RXRBP28702 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RXRBP28702 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.59■■□□□ 1.85
RXRBP28702 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC26.59■■□□□ 1.85
RXRBP28702 STK25-205ENST00000405883 1904 ntTSL 2 BASIC26.59■■□□□ 1.85
RXRBP28702 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RXRBP28702 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
RXRBP28702 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RXRBP28702 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RXRBP28702 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.58■■□□□ 1.85
RXRBP28702 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RXRBP28702 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RXRBP28702 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RXRBP28702 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RXRBP28702 NPAP1P7-201ENST00000613027 823 ntBASIC26.58■■□□□ 1.85
RXRBP28702 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC26.58■■□□□ 1.85
RXRBP28702 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RXRBP28702 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC26.57■■□□□ 1.84
RXRBP28702 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RXRBP28702 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC26.57■■□□□ 1.84
RXRBP28702 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC26.57■■□□□ 1.84
RXRBP28702 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
RXRBP28702 AP000692.2-201ENST00000608391 879 ntBASIC26.57■■□□□ 1.84
RXRBP28702 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RXRBP28702 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RXRBP28702 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RXRBP28702 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RXRBP28702 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
RXRBP28702 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC26.56■■□□□ 1.84
RXRBP28702 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RXRBP28702 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
RXRBP28702 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
RXRBP28702 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC26.56■■□□□ 1.84
RXRBP28702 AL023973.1-201ENST00000624619 620 ntBASIC26.56■■□□□ 1.84
RXRBP28702 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
RXRBP28702 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
RXRBP28702 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.56■■□□□ 1.84
RXRBP28702 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC26.55■■□□□ 1.84
RXRBP28702 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RXRBP28702 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RXRBP28702 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms