Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 RRT15YLR162W-A 189 nt0.97□□□□□ -2.25
RPB9P27999 HTB2YBL002W 396 nt0.97□□□□□ -2.25
RPB9P27999 YPR063CYPR063C 423 nt0.97□□□□□ -2.25
RPB9P27999 AHC1YOR023C 1701 nt0.97□□□□□ -2.25
RPB9P27999 SEC3YER008C 4011 nt0.96□□□□□ -2.26
RPB9P27999 SWI4YER111C 3282 nt0.96□□□□□ -2.26
RPB9P27999 RAD9YDR217C 3930 nt0.96□□□□□ -2.26
RPB9P27999 SMC1YFL008W 3678 nt0.96□□□□□ -2.26
RPB9P27999 RPL35AYDL191W 363 nt0.96□□□□□ -2.26
RPB9P27999 PAU12YGR294W 363 nt0.96□□□□□ -2.26
RPB9P27999 PAU24YBR301W 363 nt0.96□□□□□ -2.26
RPB9P27999 APL3YBL037W 3078 nt0.95□□□□□ -2.26
RPB9P27999 YAR029WYAR029W 225 nt0.95□□□□□ -2.26
RPB9P27999 RPS30BYOR182C 192 nt0.95□□□□□ -2.26
RPB9P27999 RPL33BYOR234C 324 nt0.95□□□□□ -2.26
RPB9P27999 TRM732YMR259C 4263 nt0.95□□□□□ -2.26
RPB9P27999 MSN5YDR335W 3675 nt0.95□□□□□ -2.26
RPB9P27999 YDL206WYDL206W 2289 nt0.94□□□□□ -2.26
RPB9P27999 PTP2YOR208W 2253 nt0.94□□□□□ -2.26
RPB9P27999 STO1YMR125W 2586 nt0.94□□□□□ -2.26
RPB9P27999 YIL020C-AYIL020C-A 339 nt0.94□□□□□ -2.26
RPB9P27999 YBR221W-AYBR221W-A 105 nt0.94□□□□□ -2.26
RPB9P27999 PDE2YOR360C 1581 nt0.93□□□□□ -2.26
RPB9P27999 tR(ACG)Q2tR(ACG)Q2 74 nt0.93□□□□□ -2.26
RPB9P27999 SET3YKR029C 2256 nt0.92□□□□□ -2.26
RPB9P27999 YLL007CYLL007C 1998 nt0.92□□□□□ -2.26
RPB9P27999 YDR048CYDR048C 315 nt0.92□□□□□ -2.26
RPB9P27999 RPL34BYIL052C 366 nt0.92□□□□□ -2.26
RPB9P27999 PAM16YJL104W 450 nt0.92□□□□□ -2.26
RPB9P27999 YBL008W-AYBL008W-A 240 nt0.92□□□□□ -2.26
RPB9P27999 YBR200W-AYBR200W-A 165 nt0.92□□□□□ -2.26
RPB9P27999 BUD3YCL014W 4911 nt0.92□□□□□ -2.26
RPB9P27999 YAR009CYAR009C 3591 nt0.92□□□□□ -2.26
RPB9P27999 SPT7YBR081C 3999 nt0.91□□□□□ -2.26
RPB9P27999 YHR007C-AYHR007C-A 216 nt0.91□□□□□ -2.26
RPB9P27999 YJR011CYJR011C 786 nt0.91□□□□□ -2.26
RPB9P27999 YAF9YNL107W 681 nt0.91□□□□□ -2.26
RPB9P27999 SLD3YGL113W 2007 nt0.91□□□□□ -2.26
RPB9P27999 WAR1YML076C 2835 nt0.9□□□□□ -2.26
RPB9P27999 ALY2YJL084C 3141 nt0.9□□□□□ -2.27
RPB9P27999 YDL240C-AYDL240C-A 138 nt0.9□□□□□ -2.27
RPB9P27999 INA22YIR024C 651 nt0.9□□□□□ -2.27
RPB9P27999 UBP3YER151C 2739 nt0.9□□□□□ -2.27
RPB9P27999 IFH1YLR223C 3258 nt0.9□□□□□ -2.27
RPB9P27999 OST1YJL002C 1431 nt0.89□□□□□ -2.27
RPB9P27999 NIP100YPL174C 2607 nt0.89□□□□□ -2.27
RPB9P27999 ATP6Q0085 780 nt0.89□□□□□ -2.27
RPB9P27999 TAR1YLR154W-C 375 nt0.89□□□□□ -2.27
RPB9P27999 NST1YNL091W 3723 nt0.89□□□□□ -2.27
RPB9P27999 HMRA2YCR096C 360 nt0.88□□□□□ -2.27
RPB9P27999 GEA2YEL022W 4380 nt0.88□□□□□ -2.27
RPB9P27999 EAF1YDR359C 2949 nt0.88□□□□□ -2.27
RPB9P27999 YCK3YER123W 1575 nt0.87□□□□□ -2.27
RPB9P27999 APL1YJR005W 2103 nt0.87□□□□□ -2.27
RPB9P27999 YDR102CYDR102C 333 nt0.86□□□□□ -2.27
RPB9P27999 tF(GAA)BtF(GAA)B 73 nt0.86□□□□□ -2.27
RPB9P27999 tF(GAA)FtF(GAA)F 73 nt0.86□□□□□ -2.27
RPB9P27999 tF(GAA)GtF(GAA)G 73 nt0.86□□□□□ -2.27
RPB9P27999 tF(GAA)H1tF(GAA)H1 73 nt0.86□□□□□ -2.27
RPB9P27999 tF(GAA)H2tF(GAA)H2 73 nt0.86□□□□□ -2.27
RPB9P27999 tF(GAA)MtF(GAA)M 73 nt0.86□□□□□ -2.27
RPB9P27999 tF(GAA)P1tF(GAA)P1 73 nt0.86□□□□□ -2.27
RPB9P27999 tF(GAA)P2tF(GAA)P2 73 nt0.86□□□□□ -2.27
RPB9P27999 snR36snR36 182 nt0.86□□□□□ -2.27
RPB9P27999 STB6YKL072W 2301 nt0.86□□□□□ -2.27
RPB9P27999 VAM6YDL077C 3150 nt0.85□□□□□ -2.27
RPB9P27999 PAN2YGL094C 3348 nt0.84□□□□□ -2.27
RPB9P27999 YCS4YLR272C 3531 nt0.84□□□□□ -2.27
RPB9P27999 MDS3YGL197W 4464 nt0.84□□□□□ -2.27
RPB9P27999 YDR521WYDR521W 336 nt0.84□□□□□ -2.27
RPB9P27999 QCR9YGR183C 201 nt0.84□□□□□ -2.27
RPB9P27999 YKL136WYKL136W 399 nt0.83□□□□□ -2.28
RPB9P27999 DBP6YNR038W 1890 nt0.83□□□□□ -2.28
RPB9P27999 YGL149WYGL149W 306 nt0.82□□□□□ -2.28
RPB9P27999 YOR011W-AYOR011W-A 207 nt0.82□□□□□ -2.28
RPB9P27999 YBR206WYBR206W 324 nt0.82□□□□□ -2.28
RPB9P27999 UTP20YBL004W 7482 nt0.82□□□□□ -2.28
RPB9P27999 DOP1YDR141C 5097 nt0.82□□□□□ -2.28
RPB9P27999 CDC39YCR093W 6327 nt0.81□□□□□ -2.28
RPB9P27999 SSS1YDR086C 243 nt0.81□□□□□ -2.28
RPB9P27999 YDR524W-CYDR524W-C 90 nt0.81□□□□□ -2.28
RPB9P27999 ECM12YHR021W-A 456 nt0.81□□□□□ -2.28
RPB9P27999 YKL118WYKL118W 312 nt0.81□□□□□ -2.28
RPB9P27999 RPS25BYLR333C 327 nt0.81□□□□□ -2.28
RPB9P27999 YPL225WYPL225W 441 nt0.81□□□□□ -2.28
RPB9P27999 YFL032WYFL032W 321 nt0.8□□□□□ -2.28
RPB9P27999 NUP157YER105C 4176 nt0.8□□□□□ -2.28
RPB9P27999 ROM2YLR371W 4071 nt0.79□□□□□ -2.28
RPB9P27999 snR60snR60 104 nt0.79□□□□□ -2.28
RPB9P27999 NHP2YDL208W 471 nt0.79□□□□□ -2.28
RPB9P27999 YDR183C-AYDR183C-A 258 nt0.79□□□□□ -2.28
RPB9P27999 YDR413CYDR413C 576 nt0.79□□□□□ -2.28
RPB9P27999 EMT1tM(CAU)D 73 nt0.79□□□□□ -2.28
RPB9P27999 EMT5tM(CAU)J1 73 nt0.79□□□□□ -2.28
RPB9P27999 EMT3tM(CAU)J2 73 nt0.79□□□□□ -2.28
RPB9P27999 EMT4tM(CAU)M 73 nt0.79□□□□□ -2.28
RPB9P27999 EMT2tM(CAU)O2 73 nt0.79□□□□□ -2.28
RPB9P27999 YBR064WYBR064W 429 nt0.79□□□□□ -2.28
RPB9P27999 HTL1YCR020W-B 237 nt0.78□□□□□ -2.28
RPB9P27999 OLI1Q0130 231 nt0.78□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 51.6 ms