Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP24386 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CHMP24386 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP24386 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP24386 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP24386 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP24386 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP24386 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CHMP24386 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP24386 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP24386 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP24386 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHMP24386 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHMP24386 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.72■□□□□ 0.59
CHMP24386 AC105036.2-201ENST00000569468 176 ntBASIC18.72■□□□□ 0.59
CHMP24386 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHMP24386 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
CHMP24386 FAM21FP-204ENST00000608637 956 ntBASIC18.72■□□□□ 0.59
CHMP24386 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP24386 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP24386 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP24386 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP24386 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP24386 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP24386 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP24386 TCF3P1-201ENST00000423021 1937 ntBASIC18.72■□□□□ 0.59
CHMP24386 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP24386 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP24386 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP24386 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP24386 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP24386 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP24386 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP24386 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.71■□□□□ 0.59
CHMP24386 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP24386 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP24386 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP24386 AC092720.2-201ENST00000602388 1665 ntBASIC18.71■□□□□ 0.59
CHMP24386 SLC29A4P1-201ENST00000398760 971 ntBASIC18.71■□□□□ 0.59
CHMP24386 TSPY6P-201ENST00000448518 926 ntBASIC18.71■□□□□ 0.59
CHMP24386 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP24386 RARRES2P4-201ENST00000514074 484 ntBASIC18.71■□□□□ 0.59
CHMP24386 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP24386 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP24386 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP24386 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP24386 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP24386 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.71■□□□□ 0.59
CHMP24386 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP24386 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP24386 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CHMP24386 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHMP24386 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP24386 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP24386 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP24386 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP24386 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.71■□□□□ 0.59
CHMP24386 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP24386 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.58
CHMP24386 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CHMP24386 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP24386 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.7■□□□□ 0.58
CHMP24386 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP24386 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP24386 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.7■□□□□ 0.58
CHMP24386 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP24386 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP24386 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.7■□□□□ 0.58
CHMP24386 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP24386 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP24386 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.7■□□□□ 0.58
CHMP24386 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP24386 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP24386 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP24386 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CHMP24386 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CHMP24386 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
CHMP24386 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.69■□□□□ 0.58
CHMP24386 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHMP24386 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP24386 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.69■□□□□ 0.58
CHMP24386 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.69■□□□□ 0.58
CHMP24386 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP24386 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP24386 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP24386 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHMP24386 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP24386 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP24386 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CHMP24386 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP24386 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP24386 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP24386 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CHMP24386 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP24386 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP24386 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP24386 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHMP24386 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
CHMP24386 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP24386 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms