Protein–RNA interactions for Protein: P23394

PRP28, Pre-mRNA-splicing ATP-dependent RNA helicase PRP28, yeastyeast

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP28P23394 MLH3YPL164C 2148 nt1.98□□□□□ -2.09
PRP28P23394 snR46snR46 197 nt1.98□□□□□ -2.09
PRP28P23394 HIR3YJR140C 4947 nt1.98□□□□□ -2.09
PRP28P23394 UTP22YGR090W 3714 nt1.97□□□□□ -2.09
PRP28P23394 YCR087C-AYCR087C-A 462 nt1.97□□□□□ -2.09
PRP28P23394 COF1YLL050C 432 nt1.97□□□□□ -2.09
PRP28P23394 snR52snR52 92 nt1.97□□□□□ -2.09
PRP28P23394 SAC3YDR159W 3906 nt1.97□□□□□ -2.09
PRP28P23394 ATG11YPR049C 3537 nt1.97□□□□□ -2.09
PRP28P23394 PAU3YCR104W 375 nt1.96□□□□□ -2.1
PRP28P23394 YOR072W-BYOR072W-B 162 nt1.96□□□□□ -2.1
PRP28P23394 YOR345CYOR345C 351 nt1.96□□□□□ -2.1
PRP28P23394 YPP1YGR198W 2454 nt1.96□□□□□ -2.1
PRP28P23394 AGC1YPR021C 2709 nt1.95□□□□□ -2.1
PRP28P23394 YHR214C-BYHR214C-B 5382 nt1.95□□□□□ -2.1
PRP28P23394 IRC20YLR247C 4671 nt1.95□□□□□ -2.1
PRP28P23394 PIG1YLR273C 1947 nt1.95□□□□□ -2.1
PRP28P23394 DGR2YKL121W 2559 nt1.95□□□□□ -2.1
PRP28P23394 CTR9YOL145C 3234 nt1.94□□□□□ -2.1
PRP28P23394 YOR170WYOR170W 306 nt1.94□□□□□ -2.1
PRP28P23394 YLL007CYLL007C 1998 nt1.94□□□□□ -2.1
PRP28P23394 YLL019W-AYLL019W-A 93 nt1.93□□□□□ -2.1
PRP28P23394 NEO1YIL048W 3456 nt1.93□□□□□ -2.1
PRP28P23394 YDL118WYDL118W 381 nt1.92□□□□□ -2.1
PRP28P23394 HMI1YOL095C 2121 nt1.92□□□□□ -2.1
PRP28P23394 YNL144CYNL144C 2223 nt1.92□□□□□ -2.1
PRP28P23394 IRE1YHR079C 3348 nt1.92□□□□□ -2.1
PRP28P23394 YLR419WYLR419W 4308 nt1.92□□□□□ -2.1
PRP28P23394 UBR2YLR024C 5619 nt1.91□□□□□ -2.1
PRP28P23394 AHC1YOR023C 1701 nt1.91□□□□□ -2.1
PRP28P23394 SEC31YDL195W 3822 nt1.9□□□□□ -2.1
PRP28P23394 YIR044CYIR044C 186 nt1.9□□□□□ -2.11
PRP28P23394 LRE1YCL051W 1752 nt1.9□□□□□ -2.11
PRP28P23394 YDL196WYDL196W 330 nt1.89□□□□□ -2.11
PRP28P23394 YMR175W-AYMR175W-A 195 nt1.89□□□□□ -2.11
PRP28P23394 RPL33BYOR234C 324 nt1.89□□□□□ -2.11
PRP28P23394 CUL3YGR003W 2235 nt1.89□□□□□ -2.11
PRP28P23394 YNL170WYNL170W 396 nt1.88□□□□□ -2.11
PRP28P23394 MSH6YDR097C 3729 nt1.88□□□□□ -2.11
PRP28P23394 ALK1YGL021W 2283 nt1.87□□□□□ -2.11
PRP28P23394 PMP1YCR024C-A 123 nt1.87□□□□□ -2.11
PRP28P23394 TBS1YBR150C 3285 nt1.87□□□□□ -2.11
PRP28P23394 FRK1YPL141C 2598 nt1.87□□□□□ -2.11
PRP28P23394 PTP2YOR208W 2253 nt1.87□□□□□ -2.11
PRP28P23394 PIP2YOR363C 2991 nt1.86□□□□□ -2.11
PRP28P23394 YDR521WYDR521W 336 nt1.86□□□□□ -2.11
PRP28P23394 MYO4YAL029C 4416 nt1.86□□□□□ -2.11
PRP28P23394 YGR109W-BYGR109W-B 4644 nt1.86□□□□□ -2.11
PRP28P23394 MYO2YOR326W 4725 nt1.85□□□□□ -2.11
PRP28P23394 FIG4YNL325C 2640 nt1.85□□□□□ -2.11
PRP28P23394 YOR381W-AYOR381W-A 168 nt1.85□□□□□ -2.11
PRP28P23394 YBR206WYBR206W 324 nt1.85□□□□□ -2.11
PRP28P23394 AIM44YPL158C 2277 nt1.85□□□□□ -2.11
PRP28P23394 PKH3YDR466W 2697 nt1.85□□□□□ -2.11
PRP28P23394 COG4YPR105C 2586 nt1.84□□□□□ -2.11
PRP28P23394 YHR210CYHR210C 1026 nt1.84□□□□□ -2.11
PRP28P23394 SEC63YOR254C 1992 nt1.84□□□□□ -2.11
PRP28P23394 YJR039WYJR039W 3366 nt1.84□□□□□ -2.11
PRP28P23394 COY1YKL179C 2040 nt1.84□□□□□ -2.12
PRP28P23394 LHS1YKL073W 2646 nt1.84□□□□□ -2.12
PRP28P23394 NCA2YPR155C 1851 nt1.83□□□□□ -2.12
PRP28P23394 MDS3YGL197W 4464 nt1.83□□□□□ -2.12
PRP28P23394 PKH2YOL100W 3246 nt1.83□□□□□ -2.12
PRP28P23394 SEY1YOR165W 2331 nt1.82□□□□□ -2.12
PRP28P23394 YER172C-AYER172C-A 381 nt1.82□□□□□ -2.12
PRP28P23394 tT(UGU)HtT(UGU)H 72 nt1.82□□□□□ -2.12
PRP28P23394 SLI15YBR156C 2097 nt1.82□□□□□ -2.12
PRP28P23394 PBY1YBR094W 2262 nt1.82□□□□□ -2.12
PRP28P23394 SFB2YNL049C 2631 nt1.81□□□□□ -2.12
PRP28P23394 SDH6YDR379C-A 240 nt1.81□□□□□ -2.12
PRP28P23394 SLD3YGL113W 2007 nt1.81□□□□□ -2.12
PRP28P23394 PEP1YBL017C 4740 nt1.81□□□□□ -2.12
PRP28P23394 IFH1YLR223C 3258 nt1.8□□□□□ -2.12
PRP28P23394 YDR354C-AYDR354C-A 144 nt1.8□□□□□ -2.12
PRP28P23394 YEL073CYEL073C 324 nt1.8□□□□□ -2.12
PRP28P23394 YMR247W-AYMR247W-A 144 nt1.8□□□□□ -2.12
PRP28P23394 YOR093CYOR093C 4947 nt1.8□□□□□ -2.12
PRP28P23394 ADR1YDR216W 3972 nt1.8□□□□□ -2.12
PRP28P23394 YBL053WYBL053W 375 nt1.79□□□□□ -2.12
PRP28P23394 SPO24YPR036W-A 204 nt1.79□□□□□ -2.12
PRP28P23394 GYP5YPL249C 2685 nt1.79□□□□□ -2.12
PRP28P23394 YLR035C-AYLR035C-A 3468 nt1.78□□□□□ -2.12
PRP28P23394 UTP21YLR409C 2820 nt1.78□□□□□ -2.12
PRP28P23394 YGR164WYGR164W 336 nt1.78□□□□□ -2.12
PRP28P23394 YOR161W-BYOR161W-B 261 nt1.78□□□□□ -2.12
PRP28P23394 VPS15YBR097W 4365 nt1.77□□□□□ -2.13
PRP28P23394 YIL134C-AYIL134C-A 204 nt1.77□□□□□ -2.13
PRP28P23394 HAL9YOL089C 3093 nt1.76□□□□□ -2.13
PRP28P23394 FAB1YFR019W 6837 nt1.75□□□□□ -2.13
PRP28P23394 SBE22YHR103W 2559 nt1.75□□□□□ -2.13
PRP28P23394 MON2YNL297C 4911 nt1.75□□□□□ -2.13
PRP28P23394 RPS30BYOR182C 192 nt1.74□□□□□ -2.13
PRP28P23394 RAD50YNL250W 3939 nt1.74□□□□□ -2.13
PRP28P23394 YJL026C-AYJL026C-A 222 nt1.73□□□□□ -2.13
PRP28P23394 KCS1YDR017C 3153 nt1.73□□□□□ -2.13
PRP28P23394 NUT1YGL151W 3399 nt1.71□□□□□ -2.14
PRP28P23394 PRP42YDR235W 1635 nt1.71□□□□□ -2.14
PRP28P23394 YDL206WYDL206W 2289 nt1.71□□□□□ -2.14
PRP28P23394 YOR019WYOR019W 2193 nt1.71□□□□□ -2.14
PRP28P23394 YCR038W-AYCR038W-A 126 nt1.7□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 37.4 ms