Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RFX1P22670 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.84■■□□□ 1.09
RFX1P22670 AL356652.1-201ENST00000615962 565 ntBASIC21.84■■□□□ 1.09
RFX1P22670 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RFX1P22670 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX1P22670 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RFX1P22670 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX1P22670 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFX1P22670 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RFX1P22670 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFX1P22670 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RFX1P22670 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFX1P22670 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.83■■□□□ 1.09
RFX1P22670 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFX1P22670 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.83■■□□□ 1.09
RFX1P22670 AL512625.2-201ENST00000417533 625 ntBASIC21.83■■□□□ 1.09
RFX1P22670 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RFX1P22670 AC128676.1-201ENST00000454392 318 ntBASIC21.83■■□□□ 1.09
RFX1P22670 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RFX1P22670 AC083880.1-201ENST00000608266 535 ntBASIC21.83■■□□□ 1.09
RFX1P22670 AC100791.3-201ENST00000617619 330 ntBASIC21.83■■□□□ 1.09
RFX1P22670 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFX1P22670 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFX1P22670 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
RFX1P22670 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFX1P22670 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFX1P22670 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFX1P22670 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.82■■□□□ 1.08
RFX1P22670 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX1P22670 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX1P22670 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFX1P22670 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
RFX1P22670 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.82■■□□□ 1.08
RFX1P22670 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.82■■□□□ 1.08
RFX1P22670 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.82■■□□□ 1.08
RFX1P22670 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.82■■□□□ 1.08
RFX1P22670 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.82■■□□□ 1.08
RFX1P22670 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.82■■□□□ 1.08
RFX1P22670 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RFX1P22670 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RFX1P22670 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX1P22670 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX1P22670 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.82■■□□□ 1.08
RFX1P22670 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX1P22670 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
RFX1P22670 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX1P22670 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX1P22670 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX1P22670 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.81■■□□□ 1.08
RFX1P22670 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX1P22670 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX1P22670 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX1P22670 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX1P22670 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
RFX1P22670 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RFX1P22670 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.81■■□□□ 1.08
RFX1P22670 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX1P22670 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.81■■□□□ 1.08
RFX1P22670 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.81■■□□□ 1.08
RFX1P22670 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RFX1P22670 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.81■■□□□ 1.08
RFX1P22670 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX1P22670 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.8■■□□□ 1.08
RFX1P22670 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.8■■□□□ 1.08
RFX1P22670 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.8■■□□□ 1.08
RFX1P22670 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.8■■□□□ 1.08
RFX1P22670 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX1P22670 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX1P22670 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RFX1P22670 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.8■■□□□ 1.08
RFX1P22670 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RFX1P22670 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.8■■□□□ 1.08
RFX1P22670 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX1P22670 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX1P22670 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX1P22670 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFX1P22670 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX1P22670 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.8■■□□□ 1.08
RFX1P22670 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.8■■□□□ 1.08
RFX1P22670 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.8■■□□□ 1.08
RFX1P22670 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.8■■□□□ 1.08
RFX1P22670 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFX1P22670 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.8■■□□□ 1.08
RFX1P22670 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX1P22670 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.8■■□□□ 1.08
RFX1P22670 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX1P22670 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX1P22670 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX1P22670 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX1P22670 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFX1P22670 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX1P22670 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFX1P22670 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
RFX1P22670 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX1P22670 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.79■■□□□ 1.08
RFX1P22670 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX1P22670 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RFX1P22670 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFX1P22670 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX1P22670 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms