Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.99■□□□□ 0.79
XRCC1P18887 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.99■□□□□ 0.79
XRCC1P18887 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XRCC1P18887 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.99■□□□□ 0.79
XRCC1P18887 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
XRCC1P18887 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.99■□□□□ 0.79
XRCC1P18887 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.99■□□□□ 0.79
XRCC1P18887 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
XRCC1P18887 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.99■□□□□ 0.79
XRCC1P18887 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XRCC1P18887 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.99■□□□□ 0.79
XRCC1P18887 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XRCC1P18887 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.99■□□□□ 0.79
XRCC1P18887 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
XRCC1P18887 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.99■□□□□ 0.79
XRCC1P18887 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.99■□□□□ 0.79
XRCC1P18887 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.99■□□□□ 0.79
XRCC1P18887 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XRCC1P18887 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XRCC1P18887 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XRCC1P18887 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XRCC1P18887 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
XRCC1P18887 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XRCC1P18887 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
XRCC1P18887 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XRCC1P18887 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.98■□□□□ 0.79
XRCC1P18887 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.98■□□□□ 0.79
XRCC1P18887 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XRCC1P18887 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
XRCC1P18887 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.98■□□□□ 0.79
XRCC1P18887 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
XRCC1P18887 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
XRCC1P18887 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XRCC1P18887 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
XRCC1P18887 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XRCC1P18887 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
XRCC1P18887 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
XRCC1P18887 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
XRCC1P18887 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
XRCC1P18887 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
XRCC1P18887 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
XRCC1P18887 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.97■□□□□ 0.79
XRCC1P18887 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
XRCC1P18887 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
XRCC1P18887 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
XRCC1P18887 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
XRCC1P18887 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
XRCC1P18887 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
XRCC1P18887 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
XRCC1P18887 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
XRCC1P18887 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.97■□□□□ 0.79
XRCC1P18887 AC112907.3-201ENST00000577781 2400 ntBASIC19.97■□□□□ 0.79
XRCC1P18887 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.97■□□□□ 0.79
XRCC1P18887 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
XRCC1P18887 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
XRCC1P18887 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
XRCC1P18887 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.96■□□□□ 0.79
XRCC1P18887 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
XRCC1P18887 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.96■□□□□ 0.79
XRCC1P18887 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
XRCC1P18887 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
XRCC1P18887 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.96■□□□□ 0.79
XRCC1P18887 AC011484.1-201ENST00000377652 1995 ntBASIC19.96■□□□□ 0.79
XRCC1P18887 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.96■□□□□ 0.79
XRCC1P18887 ABHD17AP1-201ENST00000358206 933 ntBASIC19.96■□□□□ 0.79
XRCC1P18887 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
XRCC1P18887 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.96■□□□□ 0.79
XRCC1P18887 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
XRCC1P18887 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.96■□□□□ 0.79
XRCC1P18887 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
XRCC1P18887 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
XRCC1P18887 AC087289.5-201ENST00000586076 3175 ntBASIC19.96■□□□□ 0.79
XRCC1P18887 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
XRCC1P18887 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
XRCC1P18887 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.96■□□□□ 0.79
XRCC1P18887 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
XRCC1P18887 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.79
XRCC1P18887 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
XRCC1P18887 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
XRCC1P18887 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
XRCC1P18887 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
XRCC1P18887 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
XRCC1P18887 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
XRCC1P18887 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.95■□□□□ 0.78
XRCC1P18887 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.95■□□□□ 0.78
XRCC1P18887 RNA5SP413-201ENST00000516373 109 ntBASIC19.95■□□□□ 0.78
XRCC1P18887 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.95■□□□□ 0.78
XRCC1P18887 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.95■□□□□ 0.78
XRCC1P18887 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.95■□□□□ 0.78
XRCC1P18887 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
XRCC1P18887 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
XRCC1P18887 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.95■□□□□ 0.78
XRCC1P18887 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.95■□□□□ 0.78
XRCC1P18887 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
XRCC1P18887 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.94■□□□□ 0.78
XRCC1P18887 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
XRCC1P18887 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.94■□□□□ 0.78
XRCC1P18887 AC087633.2-202ENST00000565166 1439 ntBASIC19.94■□□□□ 0.78
XRCC1P18887 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
XRCC1P18887 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 295.6 ms