Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC004687.1-201ENST00000579003 1625 ntBASIC16.73■□□□□ 0.27
ATF4P18848 AC009102.2-201ENST00000606772 1639 ntBASIC16.73■□□□□ 0.27
ATF4P18848 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ATF4P18848 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF4P18848 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
ATF4P18848 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF4P18848 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF4P18848 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF4P18848 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF4P18848 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF4P18848 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATF4P18848 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATF4P18848 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATF4P18848 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATF4P18848 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATF4P18848 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATF4P18848 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.72■□□□□ 0.27
ATF4P18848 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ATF4P18848 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ATF4P18848 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.72■□□□□ 0.27
ATF4P18848 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATF4P18848 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.72■□□□□ 0.27
ATF4P18848 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATF4P18848 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATF4P18848 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ATF4P18848 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.72■□□□□ 0.27
ATF4P18848 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.72■□□□□ 0.27
ATF4P18848 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATF4P18848 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATF4P18848 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATF4P18848 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATF4P18848 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ATF4P18848 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATF4P18848 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATF4P18848 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATF4P18848 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.71■□□□□ 0.27
ATF4P18848 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.71■□□□□ 0.27
ATF4P18848 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATF4P18848 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.71■□□□□ 0.27
ATF4P18848 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATF4P18848 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
ATF4P18848 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATF4P18848 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.71■□□□□ 0.27
ATF4P18848 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.71■□□□□ 0.27
ATF4P18848 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATF4P18848 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.71■□□□□ 0.27
ATF4P18848 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATF4P18848 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATF4P18848 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATF4P18848 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATF4P18848 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.71■□□□□ 0.27
ATF4P18848 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.71■□□□□ 0.27
ATF4P18848 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
ATF4P18848 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.7■□□□□ 0.26
ATF4P18848 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
ATF4P18848 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATF4P18848 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.7■□□□□ 0.26
ATF4P18848 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATF4P18848 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATF4P18848 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATF4P18848 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATF4P18848 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.7■□□□□ 0.26
ATF4P18848 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ATF4P18848 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATF4P18848 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATF4P18848 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.7■□□□□ 0.26
ATF4P18848 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATF4P18848 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATF4P18848 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ATF4P18848 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
ATF4P18848 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATF4P18848 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATF4P18848 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATF4P18848 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATF4P18848 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATF4P18848 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ATF4P18848 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.7■□□□□ 0.26
ATF4P18848 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.7■□□□□ 0.26
ATF4P18848 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
ATF4P18848 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATF4P18848 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATF4P18848 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.69■□□□□ 0.26
ATF4P18848 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.69■□□□□ 0.26
ATF4P18848 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.69■□□□□ 0.26
ATF4P18848 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.69■□□□□ 0.26
ATF4P18848 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATF4P18848 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ATF4P18848 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATF4P18848 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATF4P18848 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.69■□□□□ 0.26
ATF4P18848 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.69■□□□□ 0.26
ATF4P18848 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATF4P18848 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.69■□□□□ 0.26
ATF4P18848 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.69■□□□□ 0.26
ATF4P18848 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.69■□□□□ 0.26
ATF4P18848 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
ATF4P18848 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATF4P18848 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATF4P18848 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATF4P18848 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms