Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NCK1P16333 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NCK1P16333 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NCK1P16333 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCK1P16333 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCK1P16333 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NCK1P16333 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NCK1P16333 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.94■□□□□ 0.62
NCK1P16333 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
NCK1P16333 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCK1P16333 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCK1P16333 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.94■□□□□ 0.62
NCK1P16333 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCK1P16333 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCK1P16333 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.94■□□□□ 0.62
NCK1P16333 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCK1P16333 SLC7A5P2-201ENST00000553010 536 ntBASIC18.94■□□□□ 0.62
NCK1P16333 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.94■□□□□ 0.62
NCK1P16333 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NCK1P16333 AC120498.10-201ENST00000621827 505 ntBASIC18.94■□□□□ 0.62
NCK1P16333 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCK1P16333 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.94■□□□□ 0.62
NCK1P16333 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NCK1P16333 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NCK1P16333 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCK1P16333 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCK1P16333 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCK1P16333 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCK1P16333 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NCK1P16333 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCK1P16333 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
NCK1P16333 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCK1P16333 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCK1P16333 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCK1P16333 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCK1P16333 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NCK1P16333 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCK1P16333 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCK1P16333 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NCK1P16333 MIR939-201ENST00000401314 82 ntBASIC18.93■□□□□ 0.62
NCK1P16333 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.93■□□□□ 0.62
NCK1P16333 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCK1P16333 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCK1P16333 AC106739.1-201ENST00000617035 715 ntBASIC18.93■□□□□ 0.62
NCK1P16333 MIR6084-201ENST00000622012 110 ntBASIC18.93■□□□□ 0.62
NCK1P16333 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
NCK1P16333 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCK1P16333 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCK1P16333 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCK1P16333 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NCK1P16333 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.93■□□□□ 0.62
NCK1P16333 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCK1P16333 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
NCK1P16333 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCK1P16333 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.92■□□□□ 0.62
NCK1P16333 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCK1P16333 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCK1P16333 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCK1P16333 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.92■□□□□ 0.62
NCK1P16333 EDA-201ENST00000338901 1233 ntBASIC18.92■□□□□ 0.62
NCK1P16333 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
NCK1P16333 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCK1P16333 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.92■□□□□ 0.62
NCK1P16333 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
NCK1P16333 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCK1P16333 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCK1P16333 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.92■□□□□ 0.62
NCK1P16333 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCK1P16333 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.92■□□□□ 0.62
NCK1P16333 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NCK1P16333 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCK1P16333 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.92■□□□□ 0.62
NCK1P16333 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCK1P16333 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.92■□□□□ 0.62
NCK1P16333 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.92■□□□□ 0.62
NCK1P16333 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCK1P16333 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NCK1P16333 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCK1P16333 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCK1P16333 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NCK1P16333 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.91■□□□□ 0.62
NCK1P16333 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.91■□□□□ 0.62
NCK1P16333 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCK1P16333 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCK1P16333 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NCK1P16333 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NCK1P16333 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NCK1P16333 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.91■□□□□ 0.62
NCK1P16333 AC010141.2-201ENST00000452426 721 ntBASIC18.91■□□□□ 0.62
NCK1P16333 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.91■□□□□ 0.62
NCK1P16333 AL354811.1-201ENST00000610286 706 ntBASIC18.91■□□□□ 0.62
NCK1P16333 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCK1P16333 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.91■□□□□ 0.62
NCK1P16333 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NCK1P16333 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCK1P16333 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCK1P16333 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.91■□□□□ 0.62
NCK1P16333 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCK1P16333 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
NCK1P16333 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms