Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.93■□□□□ 0.62
TPRP12270 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPRP12270 EMBP1-201ENST00000458200 901 ntBASIC18.92■□□□□ 0.62
TPRP12270 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPRP12270 NPAP1P7-201ENST00000613027 823 ntBASIC18.92■□□□□ 0.62
TPRP12270 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
TPRP12270 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPRP12270 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPRP12270 AC003102.1-202ENST00000563394 1796 ntBASIC18.92■□□□□ 0.62
TPRP12270 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPRP12270 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPRP12270 FSCN1P1-201ENST00000568912 1481 ntBASIC18.92■□□□□ 0.62
TPRP12270 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TPRP12270 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.92■□□□□ 0.62
TPRP12270 SLC25A6P4-201ENST00000586535 553 ntBASIC18.92■□□□□ 0.62
TPRP12270 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.92■□□□□ 0.62
TPRP12270 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TPRP12270 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPRP12270 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.92■□□□□ 0.62
TPRP12270 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.91■□□□□ 0.62
TPRP12270 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPRP12270 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TPRP12270 AC007663.1-201ENST00000438948 1240 ntBASIC18.91■□□□□ 0.62
TPRP12270 AP002469.2-201ENST00000531724 424 ntBASIC18.91■□□□□ 0.62
TPRP12270 HYMAI.1-201ENST00000620949 238 ntBASIC18.91■□□□□ 0.62
TPRP12270 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.91■□□□□ 0.62
TPRP12270 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPRP12270 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPRP12270 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TPRP12270 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPRP12270 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPRP12270 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TPRP12270 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPRP12270 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPRP12270 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.91■□□□□ 0.62
TPRP12270 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.91■□□□□ 0.62
TPRP12270 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.91■□□□□ 0.62
TPRP12270 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.91■□□□□ 0.62
TPRP12270 DGCR10-201ENST00000609839 495 ntBASIC18.91■□□□□ 0.62
TPRP12270 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.91■□□□□ 0.62
TPRP12270 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPRP12270 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPRP12270 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.91■□□□□ 0.62
TPRP12270 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPRP12270 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPRP12270 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.9■□□□□ 0.62
TPRP12270 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.9■□□□□ 0.62
TPRP12270 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPRP12270 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPRP12270 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPRP12270 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPRP12270 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.9■□□□□ 0.62
TPRP12270 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.9■□□□□ 0.62
TPRP12270 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPRP12270 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPRP12270 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPRP12270 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
TPRP12270 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPRP12270 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TPRP12270 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TPRP12270 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TPRP12270 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TPRP12270 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPRP12270 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TPRP12270 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TPRP12270 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.89■□□□□ 0.61
TPRP12270 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TPRP12270 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.89■□□□□ 0.61
TPRP12270 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.89■□□□□ 0.61
TPRP12270 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPRP12270 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPRP12270 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPRP12270 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPRP12270 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TPRP12270 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.89■□□□□ 0.61
TPRP12270 B3GAT3P1-201ENST00000471720 806 ntBASIC18.89■□□□□ 0.61
TPRP12270 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TPRP12270 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.89■□□□□ 0.61
TPRP12270 AC120114.3-201ENST00000611923 658 ntBASIC18.89■□□□□ 0.61
TPRP12270 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPRP12270 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.89■□□□□ 0.61
TPRP12270 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.88■□□□□ 0.61
TPRP12270 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TPRP12270 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.88■□□□□ 0.61
TPRP12270 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TPRP12270 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TPRP12270 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TPRP12270 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.88■□□□□ 0.61
TPRP12270 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TPRP12270 AC083849.1-201ENST00000615227 514 ntBASIC18.88■□□□□ 0.61
TPRP12270 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPRP12270 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPRP12270 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TPRP12270 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TPRP12270 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPRP12270 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPRP12270 LINC01124-201ENST00000409786 2117 ntBASIC18.88■□□□□ 0.61
TPRP12270 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.88■□□□□ 0.61
TPRP12270 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.88■□□□□ 0.61
TPRP12270 AC106795.1-205ENST00000512851 1056 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms