Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RARAP10276 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.08■□□□□ 0.96
RARAP10276 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RARAP10276 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RARAP10276 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.07■□□□□ 0.96
RARAP10276 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.07■□□□□ 0.96
RARAP10276 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RARAP10276 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RARAP10276 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RARAP10276 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RARAP10276 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RARAP10276 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RARAP10276 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RARAP10276 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RARAP10276 MCRIP2P1-201ENST00000394346 511 ntBASIC21.07■□□□□ 0.96
RARAP10276 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.07■□□□□ 0.96
RARAP10276 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
RARAP10276 AC080038.1-201ENST00000611274 1154 ntBASIC21.07■□□□□ 0.96
RARAP10276 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.07■□□□□ 0.96
RARAP10276 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.07■□□□□ 0.96
RARAP10276 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RARAP10276 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RARAP10276 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.07■□□□□ 0.96
RARAP10276 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RARAP10276 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.07■□□□□ 0.96
RARAP10276 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.07■□□□□ 0.96
RARAP10276 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RARAP10276 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.06■□□□□ 0.96
RARAP10276 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.06■□□□□ 0.96
RARAP10276 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RARAP10276 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RARAP10276 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RARAP10276 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RARAP10276 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RARAP10276 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.06■□□□□ 0.96
RARAP10276 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.06■□□□□ 0.96
RARAP10276 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.06■□□□□ 0.96
RARAP10276 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RARAP10276 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RARAP10276 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RARAP10276 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RARAP10276 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RARAP10276 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RARAP10276 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RARAP10276 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RARAP10276 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RARAP10276 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.05■□□□□ 0.96
RARAP10276 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.05■□□□□ 0.96
RARAP10276 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RARAP10276 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RARAP10276 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RARAP10276 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.05■□□□□ 0.96
RARAP10276 AC069236.1-201ENST00000604339 616 ntBASIC21.05■□□□□ 0.96
RARAP10276 AC073111.5-205ENST00000641717 521 ntBASIC21.05■□□□□ 0.96
RARAP10276 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RARAP10276 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RARAP10276 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RARAP10276 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RARAP10276 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RARAP10276 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.05■□□□□ 0.96
RARAP10276 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RARAP10276 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RARAP10276 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.05■□□□□ 0.96
RARAP10276 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RARAP10276 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RARAP10276 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RARAP10276 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RARAP10276 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RARAP10276 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RARAP10276 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.04■□□□□ 0.96
RARAP10276 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.04■□□□□ 0.96
RARAP10276 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RARAP10276 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.04■□□□□ 0.96
RARAP10276 AL137784.2-201ENST00000607332 1000 ntBASIC21.04■□□□□ 0.96
RARAP10276 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.04■□□□□ 0.96
RARAP10276 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
RARAP10276 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RARAP10276 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.04■□□□□ 0.96
RARAP10276 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.04■□□□□ 0.96
RARAP10276 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RARAP10276 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.04■□□□□ 0.96
RARAP10276 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RARAP10276 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.04■□□□□ 0.96
RARAP10276 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RARAP10276 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RARAP10276 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.03■□□□□ 0.96
RARAP10276 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RARAP10276 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RARAP10276 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.03■□□□□ 0.96
RARAP10276 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.03■□□□□ 0.96
RARAP10276 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
RARAP10276 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RARAP10276 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.03■□□□□ 0.96
RARAP10276 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RARAP10276 CDCA4P2-201ENST00000441182 718 ntBASIC21.03■□□□□ 0.96
RARAP10276 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.03■□□□□ 0.96
RARAP10276 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.03■□□□□ 0.96
RARAP10276 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RARAP10276 AC005181.1-201ENST00000604782 1256 ntBASIC21.03■□□□□ 0.96
RARAP10276 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms