Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 YLR232WYLR232W 348 nt2.76□□□□□ -1.97
TY1A-PR2P0CX60 YJR039WYJR039W 3366 nt2.76□□□□□ -1.97
TY1A-PR2P0CX60 GLG1YKR058W 1851 nt2.75□□□□□ -1.97
TY1A-PR2P0CX60 RSE1YML049C 4086 nt2.75□□□□□ -1.97
TY1A-PR2P0CX60 YER078W-AYER078W-A 165 nt2.74□□□□□ -1.97
TY1A-PR2P0CX60 IRE1YHR079C 3348 nt2.74□□□□□ -1.97
TY1A-PR2P0CX60 SEC21YNL287W 2808 nt2.73□□□□□ -1.97
TY1A-PR2P0CX60 DBP10YDL031W 2988 nt2.73□□□□□ -1.97
TY1A-PR2P0CX60 TUS1YLR425W 3924 nt2.72□□□□□ -1.97
TY1A-PR2P0CX60 MDS3YGL197W 4464 nt2.72□□□□□ -1.97
TY1A-PR2P0CX60 MET18YIL128W 3099 nt2.72□□□□□ -1.97
TY1A-PR2P0CX60 DRS2YAL026C 4068 nt2.71□□□□□ -1.98
TY1A-PR2P0CX60 TMA17YDL110C 453 nt2.71□□□□□ -1.98
TY1A-PR2P0CX60 YER172C-AYER172C-A 381 nt2.71□□□□□ -1.98
TY1A-PR2P0CX60 NMD2YHR077C 3270 nt2.71□□□□□ -1.98
TY1A-PR2P0CX60 SLH1YGR271W 5904 nt2.71□□□□□ -1.98
TY1A-PR2P0CX60 YEF3YLR249W 3135 nt2.69□□□□□ -1.98
TY1A-PR2P0CX60 POL5YEL055C 3069 nt2.69□□□□□ -1.98
TY1A-PR2P0CX60 tL(UAG)JtL(UAG)J 82 nt2.69□□□□□ -1.98
TY1A-PR2P0CX60 tL(UAG)L1tL(UAG)L1 82 nt2.69□□□□□ -1.98
TY1A-PR2P0CX60 tL(UAG)L2tL(UAG)L2 82 nt2.69□□□□□ -1.98
TY1A-PR2P0CX60 SMC1YFL008W 3678 nt2.69□□□□□ -1.98
TY1A-PR2P0CX60 PET309YLR067C 2898 nt2.69□□□□□ -1.98
TY1A-PR2P0CX60 PMR1YGL167C 2853 nt2.68□□□□□ -1.98
TY1A-PR2P0CX60 PNC1YGL037C 651 nt2.68□□□□□ -1.98
TY1A-PR2P0CX60 TRM3YDL112W 4311 nt2.68□□□□□ -1.98
TY1A-PR2P0CX60 FLO1YAR050W 4614 nt2.68□□□□□ -1.98
TY1A-PR2P0CX60 COA6YMR244C-A 315 nt2.67□□□□□ -1.98
TY1A-PR2P0CX60 AKR1YDR264C 2295 nt2.66□□□□□ -1.98
TY1A-PR2P0CX60 MOT1YPL082C 5604 nt2.66□□□□□ -1.98
TY1A-PR2P0CX60 RIF1YBR275C 5751 nt2.66□□□□□ -1.98
TY1A-PR2P0CX60 ASE1YOR058C 2658 nt2.65□□□□□ -1.98
TY1A-PR2P0CX60 SEY1YOR165W 2331 nt2.65□□□□□ -1.98
TY1A-PR2P0CX60 TRS130YMR218C 3309 nt2.65□□□□□ -1.99
TY1A-PR2P0CX60 ORC3YLL004W 1851 nt2.65□□□□□ -1.99
TY1A-PR2P0CX60 snR75snR75 89 nt2.64□□□□□ -1.99
TY1A-PR2P0CX60 YLR286W-AYLR286W-A 135 nt2.64□□□□□ -1.99
TY1A-PR2P0CX60 SVL3YPL032C 2478 nt2.64□□□□□ -1.99
TY1A-PR2P0CX60 COP1YDL145C 3606 nt2.63□□□□□ -1.99
TY1A-PR2P0CX60 UFD4YKL010C 4452 nt2.62□□□□□ -1.99
TY1A-PR2P0CX60 MYO2YOR326W 4725 nt2.62□□□□□ -1.99
TY1A-PR2P0CX60 YKL096C-BYKL096C-B 150 nt2.62□□□□□ -1.99
TY1A-PR2P0CX60 SEC7YDR170C 6030 nt2.62□□□□□ -1.99
TY1A-PR2P0CX60 DYN1YKR054C 12279 nt2.62□□□□□ -1.99
TY1A-PR2P0CX60 TIM9YEL020W-A 264 nt2.61□□□□□ -1.99
TY1A-PR2P0CX60 TRL1YJL087C 2484 nt2.61□□□□□ -1.99
TY1A-PR2P0CX60 YLR041WYLR041W 321 nt2.6□□□□□ -1.99
TY1A-PR2P0CX60 TCB2YNL087W 3537 nt2.6□□□□□ -1.99
TY1A-PR2P0CX60 ILS1YBL076C 3219 nt2.59□□□□□ -1.99
TY1A-PR2P0CX60 SAP1YER047C 2694 nt2.59□□□□□ -1.99
TY1A-PR2P0CX60 YHR086W-AYHR086W-A 162 nt2.59□□□□□ -1.99
TY1A-PR2P0CX60 SYH1YPL105C 2550 nt2.59□□□□□ -1.99
TY1A-PR2P0CX60 RPM2YML091C 3609 nt2.59□□□□□ -2
TY1A-PR2P0CX60 TOF1YNL273W 3717 nt2.59□□□□□ -2
TY1A-PR2P0CX60 YPR097WYPR097W 3222 nt2.59□□□□□ -2
TY1A-PR2P0CX60 SEC10YLR166C 2616 nt2.58□□□□□ -2
TY1A-PR2P0CX60 ALY2YJL084C 3141 nt2.58□□□□□ -2
TY1A-PR2P0CX60 GYP5YPL249C 2685 nt2.57□□□□□ -2
TY1A-PR2P0CX60 tQ(UUG)BtQ(UUG)B 72 nt2.57□□□□□ -2
TY1A-PR2P0CX60 SPO14YKR031C 5052 nt2.57□□□□□ -2
TY1A-PR2P0CX60 TOM1YDR457W 9807 nt2.57□□□□□ -2
TY1A-PR2P0CX60 YBR200W-AYBR200W-A 165 nt2.56□□□□□ -2
TY1A-PR2P0CX60 UBR1YGR184C 5853 nt2.56□□□□□ -2
TY1A-PR2P0CX60 SRB8YCR081W 4284 nt2.56□□□□□ -2
TY1A-PR2P0CX60 STE6YKL209C 3873 nt2.55□□□□□ -2
TY1A-PR2P0CX60 BNR1YIL159W 4128 nt2.55□□□□□ -2
TY1A-PR2P0CX60 LCL1YPL056C 306 nt2.55□□□□□ -2
TY1A-PR2P0CX60 SPO24YPR036W-A 204 nt2.55□□□□□ -2
TY1A-PR2P0CX60 PRP8YHR165C 7242 nt2.55□□□□□ -2
TY1A-PR2P0CX60 PAN2YGL094C 3348 nt2.55□□□□□ -2
TY1A-PR2P0CX60 SFB2YNL049C 2631 nt2.55□□□□□ -2
TY1A-PR2P0CX60 NUP157YER105C 4176 nt2.54□□□□□ -2
TY1A-PR2P0CX60 YOR343W-BYOR343W-B 5313 nt2.54□□□□□ -2
TY1A-PR2P0CX60 ECM29YHL030W 5607 nt2.54□□□□□ -2
TY1A-PR2P0CX60 MMS4YBR098W 2076 nt2.53□□□□□ -2
TY1A-PR2P0CX60 NOP9YJL010C 2001 nt2.53□□□□□ -2
TY1A-PR2P0CX60 RAD9YDR217C 3930 nt2.53□□□□□ -2
TY1A-PR2P0CX60 RPS29AYLR388W 171 nt2.53□□□□□ -2
TY1A-PR2P0CX60 PDR3YBL005W 2931 nt2.53□□□□□ -2
TY1A-PR2P0CX60 SSD1YDR293C 3753 nt2.52□□□□□ -2.01
TY1A-PR2P0CX60 CHC1YGL206C 4962 nt2.52□□□□□ -2.01
TY1A-PR2P0CX60 IES6YEL044W 501 nt2.51□□□□□ -2.01
TY1A-PR2P0CX60 YKL225WYKL225W 348 nt2.51□□□□□ -2.01
TY1A-PR2P0CX60 CHS1YNL192W 3396 nt2.5□□□□□ -2.01
TY1A-PR2P0CX60 YDR209CYDR209C 414 nt2.49□□□□□ -2.01
TY1A-PR2P0CX60 GIP3YPL137C 3831 nt2.48□□□□□ -2.01
TY1A-PR2P0CX60 YLR149C-AYLR149C-A 87 nt2.48□□□□□ -2.01
TY1A-PR2P0CX60 RGA1YOR127W 3024 nt2.48□□□□□ -2.01
TY1A-PR2P0CX60 FAR11YNL127W 2862 nt2.47□□□□□ -2.01
TY1A-PR2P0CX60 RPL26BYGR034W 384 nt2.47□□□□□ -2.01
TY1A-PR2P0CX60 snR190snR190 190 nt2.47□□□□□ -2.01
TY1A-PR2P0CX60 BPT1YLL015W 4680 nt2.47□□□□□ -2.01
TY1A-PR2P0CX60 NAB6YML117W 3405 nt2.46□□□□□ -2.01
TY1A-PR2P0CX60 GEA1YJR031C 4227 nt2.46□□□□□ -2.02
TY1A-PR2P0CX60 UTP21YLR409C 2820 nt2.46□□□□□ -2.02
TY1A-PR2P0CX60 YAR009CYAR009C 3591 nt2.46□□□□□ -2.02
TY1A-PR2P0CX60 CYR1YJL005W 6081 nt2.45□□□□□ -2.02
TY1A-PR2P0CX60 NUT1YGL151W 3399 nt2.45□□□□□ -2.02
TY1A-PR2P0CX60 ROM2YLR371W 4071 nt2.45□□□□□ -2.02
TY1A-PR2P0CX60 WAR1YML076C 2835 nt2.45□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms