Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MMP2P08253 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP2P08253 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MMP2P08253 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.27■□□□□ 0.84
MMP2P08253 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.27■□□□□ 0.84
MMP2P08253 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
MMP2P08253 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.27■□□□□ 0.83
MMP2P08253 KRT8P20-201ENST00000423953 1409 ntBASIC20.27■□□□□ 0.83
MMP2P08253 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
MMP2P08253 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
MMP2P08253 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP2P08253 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP2P08253 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP2P08253 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP2P08253 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.26■□□□□ 0.83
MMP2P08253 AL691432.2-201ENST00000607222 2038 ntBASIC20.26■□□□□ 0.83
MMP2P08253 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP2P08253 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP2P08253 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP2P08253 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.26■□□□□ 0.83
MMP2P08253 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MMP2P08253 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
MMP2P08253 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.26■□□□□ 0.83
MMP2P08253 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MMP2P08253 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
MMP2P08253 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP2P08253 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP2P08253 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MMP2P08253 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.26■□□□□ 0.83
MMP2P08253 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
MMP2P08253 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP2P08253 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.25■□□□□ 0.83
MMP2P08253 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MMP2P08253 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.25■□□□□ 0.83
MMP2P08253 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP2P08253 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.25■□□□□ 0.83
MMP2P08253 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP2P08253 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP2P08253 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.25■□□□□ 0.83
MMP2P08253 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.25■□□□□ 0.83
MMP2P08253 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.25■□□□□ 0.83
MMP2P08253 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.25■□□□□ 0.83
MMP2P08253 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
MMP2P08253 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.25■□□□□ 0.83
MMP2P08253 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP2P08253 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MMP2P08253 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP2P08253 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MMP2P08253 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP2P08253 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.25■□□□□ 0.83
MMP2P08253 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.25■□□□□ 0.83
MMP2P08253 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP2P08253 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MMP2P08253 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP2P08253 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP2P08253 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP2P08253 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP2P08253 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP2P08253 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
MMP2P08253 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.24■□□□□ 0.83
MMP2P08253 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.24■□□□□ 0.83
MMP2P08253 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.24■□□□□ 0.83
MMP2P08253 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.24■□□□□ 0.83
MMP2P08253 HLA-B-256ENST00000639848 1089 ntBASIC20.24■□□□□ 0.83
MMP2P08253 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP2P08253 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MMP2P08253 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.24■□□□□ 0.83
MMP2P08253 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.24■□□□□ 0.83
MMP2P08253 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP2P08253 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.23■□□□□ 0.83
MMP2P08253 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.23■□□□□ 0.83
MMP2P08253 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.23■□□□□ 0.83
MMP2P08253 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
MMP2P08253 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP2P08253 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.23■□□□□ 0.83
MMP2P08253 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.23■□□□□ 0.83
MMP2P08253 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.23■□□□□ 0.83
MMP2P08253 AC005829.2-201ENST00000571422 1056 ntBASIC20.23■□□□□ 0.83
MMP2P08253 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP2P08253 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP2P08253 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP2P08253 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP2P08253 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
MMP2P08253 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP2P08253 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP2P08253 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP2P08253 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
MMP2P08253 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.22■□□□□ 0.83
MMP2P08253 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP2P08253 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.22■□□□□ 0.83
MMP2P08253 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP2P08253 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP2P08253 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP2P08253 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
MMP2P08253 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP2P08253 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP2P08253 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP2P08253 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.22■□□□□ 0.83
MMP2P08253 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.22■□□□□ 0.83
MMP2P08253 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms