Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 MIR4758-201ENST00000577688 71 ntBASIC19.73■□□□□ 0.75
CAPN1P07384 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
CAPN1P07384 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.73■□□□□ 0.75
CAPN1P07384 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
CAPN1P07384 AL591742.1-201ENST00000604433 565 ntBASIC19.73■□□□□ 0.75
CAPN1P07384 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.73■□□□□ 0.75
CAPN1P07384 AC008694.1-202ENST00000636953 945 ntBASIC19.73■□□□□ 0.75
CAPN1P07384 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN1P07384 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN1P07384 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN1P07384 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.73■□□□□ 0.75
CAPN1P07384 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN1P07384 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN1P07384 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN1P07384 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN1P07384 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CAPN1P07384 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN1P07384 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CAPN1P07384 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN1P07384 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN1P07384 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CAPN1P07384 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CAPN1P07384 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.72■□□□□ 0.75
CAPN1P07384 AC007322.3-201ENST00000426526 701 ntBASIC19.72■□□□□ 0.75
CAPN1P07384 TSPY20P-201ENST00000450910 630 ntBASIC19.72■□□□□ 0.75
CAPN1P07384 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.72■□□□□ 0.75
CAPN1P07384 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CAPN1P07384 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CAPN1P07384 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN1P07384 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN1P07384 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CAPN1P07384 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN1P07384 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.71■□□□□ 0.75
CAPN1P07384 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN1P07384 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN1P07384 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CAPN1P07384 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.71■□□□□ 0.75
CAPN1P07384 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN1P07384 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.71■□□□□ 0.75
CAPN1P07384 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CAPN1P07384 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN1P07384 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN1P07384 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.71■□□□□ 0.75
CAPN1P07384 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN1P07384 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN1P07384 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CAPN1P07384 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN1P07384 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
CAPN1P07384 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN1P07384 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN1P07384 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN1P07384 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN1P07384 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN1P07384 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN1P07384 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN1P07384 RARRES2P4-201ENST00000514074 484 ntBASIC19.7■□□□□ 0.74
CAPN1P07384 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.7■□□□□ 0.74
CAPN1P07384 MIR4651-201ENST00000582622 73 ntBASIC19.7■□□□□ 0.74
CAPN1P07384 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.7■□□□□ 0.74
CAPN1P07384 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN1P07384 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN1P07384 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN1P07384 SMG8-203ENST00000578922 2178 ntBASIC19.7■□□□□ 0.74
CAPN1P07384 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.7■□□□□ 0.74
CAPN1P07384 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.7■□□□□ 0.74
CAPN1P07384 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.69■□□□□ 0.74
CAPN1P07384 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN1P07384 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CAPN1P07384 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.69■□□□□ 0.74
CAPN1P07384 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN1P07384 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
CAPN1P07384 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN1P07384 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN1P07384 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN1P07384 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN1P07384 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.69■□□□□ 0.74
CAPN1P07384 AC092118.2-201ENST00000613495 667 ntBASIC19.69■□□□□ 0.74
CAPN1P07384 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN1P07384 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN1P07384 TMEM191A-211ENST00000637163 1067 ntBASIC19.69■□□□□ 0.74
CAPN1P07384 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CAPN1P07384 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CAPN1P07384 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN1P07384 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN1P07384 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN1P07384 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN1P07384 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.69■□□□□ 0.74
CAPN1P07384 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN1P07384 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN1P07384 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPN1P07384 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CAPN1P07384 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CAPN1P07384 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.68■□□□□ 0.74
CAPN1P07384 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN1P07384 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN1P07384 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN1P07384 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPN1P07384 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.68■□□□□ 0.74
CAPN1P07384 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.68■□□□□ 0.74
CAPN1P07384 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms