Protein–RNA interactions for Protein: P05386

RPLP1, 60S acidic ribosomal protein P1, humanhuman

Known RBP Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP1P05386 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPLP1P05386 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.09■□□□□ 0.17
RPLP1P05386 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPLP1P05386 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPLP1P05386 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPLP1P05386 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RPLP1P05386 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.09■□□□□ 0.17
RPLP1P05386 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.09■□□□□ 0.17
RPLP1P05386 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RPLP1P05386 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPLP1P05386 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPLP1P05386 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.09■□□□□ 0.17
RPLP1P05386 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.09■□□□□ 0.17
RPLP1P05386 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RPLP1P05386 AC098934.4-201ENST00000564127 592 ntBASIC16.09■□□□□ 0.17
RPLP1P05386 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.09■□□□□ 0.17
RPLP1P05386 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.09■□□□□ 0.17
RPLP1P05386 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPLP1P05386 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPLP1P05386 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RPLP1P05386 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.09■□□□□ 0.17
RPLP1P05386 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPLP1P05386 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.09■□□□□ 0.17
RPLP1P05386 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPLP1P05386 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.09■□□□□ 0.17
RPLP1P05386 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.08■□□□□ 0.17
RPLP1P05386 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.08■□□□□ 0.17
RPLP1P05386 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
RPLP1P05386 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.08■□□□□ 0.17
RPLP1P05386 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RPLP1P05386 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.08■□□□□ 0.17
RPLP1P05386 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.08■□□□□ 0.17
RPLP1P05386 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RPLP1P05386 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RPLP1P05386 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RPLP1P05386 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RPLP1P05386 MIR4758-201ENST00000577688 71 ntBASIC16.08■□□□□ 0.16
RPLP1P05386 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
RPLP1P05386 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RPLP1P05386 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RPLP1P05386 AC005229.4-201ENST00000610085 2198 ntBASIC16.08■□□□□ 0.16
RPLP1P05386 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RPLP1P05386 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RPLP1P05386 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RPLP1P05386 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RPLP1P05386 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.08■□□□□ 0.16
RPLP1P05386 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
RPLP1P05386 AC116050.2-201ENST00000612102 1779 ntBASIC16.08■□□□□ 0.16
RPLP1P05386 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
RPLP1P05386 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.08■□□□□ 0.16
RPLP1P05386 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RPLP1P05386 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.07■□□□□ 0.16
RPLP1P05386 AC069152.1-201ENST00000438030 544 ntBASIC16.07■□□□□ 0.16
RPLP1P05386 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.07■□□□□ 0.16
RPLP1P05386 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.07■□□□□ 0.16
RPLP1P05386 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.07■□□□□ 0.16
RPLP1P05386 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.07■□□□□ 0.16
RPLP1P05386 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.07■□□□□ 0.16
RPLP1P05386 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.07■□□□□ 0.16
RPLP1P05386 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.07■□□□□ 0.16
RPLP1P05386 AC012183.1-201ENST00000625197 499 ntBASIC16.07■□□□□ 0.16
RPLP1P05386 AC133041.1-202ENST00000642053 222 ntBASIC16.07■□□□□ 0.16
RPLP1P05386 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.07■□□□□ 0.16
RPLP1P05386 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RPLP1P05386 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPLP1P05386 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPLP1P05386 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPLP1P05386 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RPLP1P05386 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.06■□□□□ 0.16
RPLP1P05386 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.06■□□□□ 0.16
RPLP1P05386 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPLP1P05386 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPLP1P05386 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
RPLP1P05386 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPLP1P05386 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPLP1P05386 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPLP1P05386 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RPLP1P05386 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPLP1P05386 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.06■□□□□ 0.16
RPLP1P05386 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPLP1P05386 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.06■□□□□ 0.16
RPLP1P05386 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms