Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
OPN1SWP03999 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
OPN1SWP03999 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
OPN1SWP03999 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
OPN1SWP03999 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.73■□□□□ 0.59
OPN1SWP03999 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
OPN1SWP03999 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.73■□□□□ 0.59
OPN1SWP03999 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
OPN1SWP03999 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
OPN1SWP03999 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
OPN1SWP03999 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.72■□□□□ 0.59
OPN1SWP03999 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.72■□□□□ 0.59
OPN1SWP03999 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
OPN1SWP03999 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
OPN1SWP03999 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
OPN1SWP03999 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
OPN1SWP03999 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
OPN1SWP03999 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.72■□□□□ 0.59
OPN1SWP03999 KRT19P1-201ENST00000405746 1186 ntBASIC18.72■□□□□ 0.59
OPN1SWP03999 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.72■□□□□ 0.59
OPN1SWP03999 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
OPN1SWP03999 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.72■□□□□ 0.59
OPN1SWP03999 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.72■□□□□ 0.59
OPN1SWP03999 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.72■□□□□ 0.59
OPN1SWP03999 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
OPN1SWP03999 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
OPN1SWP03999 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
OPN1SWP03999 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
OPN1SWP03999 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
OPN1SWP03999 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
OPN1SWP03999 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPN1SWP03999 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.71■□□□□ 0.59
OPN1SWP03999 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
OPN1SWP03999 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.71■□□□□ 0.59
OPN1SWP03999 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
OPN1SWP03999 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPN1SWP03999 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPN1SWP03999 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
OPN1SWP03999 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPN1SWP03999 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPN1SWP03999 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPN1SWP03999 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
OPN1SWP03999 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
OPN1SWP03999 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
OPN1SWP03999 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.71■□□□□ 0.59
OPN1SWP03999 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
OPN1SWP03999 MYCNOS-205ENST00000641950 531 ntBASIC18.71■□□□□ 0.59
OPN1SWP03999 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPN1SWP03999 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.71■□□□□ 0.59
OPN1SWP03999 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.71■□□□□ 0.59
OPN1SWP03999 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPN1SWP03999 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
OPN1SWP03999 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPN1SWP03999 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPN1SWP03999 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
OPN1SWP03999 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
OPN1SWP03999 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
OPN1SWP03999 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
OPN1SWP03999 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.71■□□□□ 0.58
OPN1SWP03999 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
OPN1SWP03999 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.7■□□□□ 0.58
OPN1SWP03999 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.7■□□□□ 0.58
OPN1SWP03999 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OPN1SWP03999 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OPN1SWP03999 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
OPN1SWP03999 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OPN1SWP03999 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
OPN1SWP03999 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
OPN1SWP03999 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.7■□□□□ 0.58
OPN1SWP03999 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
OPN1SWP03999 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
OPN1SWP03999 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.7■□□□□ 0.58
OPN1SWP03999 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
OPN1SWP03999 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.7■□□□□ 0.58
OPN1SWP03999 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.7■□□□□ 0.58
OPN1SWP03999 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.7■□□□□ 0.58
OPN1SWP03999 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
OPN1SWP03999 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
OPN1SWP03999 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
OPN1SWP03999 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
OPN1SWP03999 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OPN1SWP03999 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.7■□□□□ 0.58
OPN1SWP03999 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
OPN1SWP03999 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.7■□□□□ 0.58
OPN1SWP03999 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
OPN1SWP03999 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.69■□□□□ 0.58
OPN1SWP03999 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
OPN1SWP03999 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
OPN1SWP03999 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.69■□□□□ 0.58
OPN1SWP03999 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
OPN1SWP03999 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.69■□□□□ 0.58
OPN1SWP03999 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.69■□□□□ 0.58
OPN1SWP03999 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
OPN1SWP03999 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
OPN1SWP03999 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
OPN1SWP03999 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
OPN1SWP03999 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
OPN1SWP03999 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
OPN1SWP03999 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.69■□□□□ 0.58
OPN1SWP03999 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms