Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHRNA1P02708 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHRNA1P02708 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHRNA1P02708 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CHRNA1P02708 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CHRNA1P02708 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHRNA1P02708 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CHRNA1P02708 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHRNA1P02708 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CHRNA1P02708 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.97■■□□□ 1.11
CHRNA1P02708 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHRNA1P02708 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CHRNA1P02708 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHRNA1P02708 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHRNA1P02708 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CHRNA1P02708 HLA-G-202ENST00000376815 851 ntBASIC21.96■■□□□ 1.11
CHRNA1P02708 HLA-G-203ENST00000376818 1127 ntBASIC21.96■■□□□ 1.11
CHRNA1P02708 AL353807.1-201ENST00000427475 662 ntBASIC21.96■■□□□ 1.11
CHRNA1P02708 AL355355.2-201ENST00000442321 338 ntBASIC21.96■■□□□ 1.11
CHRNA1P02708 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHRNA1P02708 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.96■■□□□ 1.11
CHRNA1P02708 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CHRNA1P02708 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.96■■□□□ 1.11
CHRNA1P02708 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHRNA1P02708 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.96■■□□□ 1.11
CHRNA1P02708 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHRNA1P02708 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHRNA1P02708 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CHRNA1P02708 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.96■■□□□ 1.11
CHRNA1P02708 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CHRNA1P02708 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CHRNA1P02708 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.95■■□□□ 1.1
CHRNA1P02708 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.95■■□□□ 1.1
CHRNA1P02708 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHRNA1P02708 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHRNA1P02708 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.95■■□□□ 1.1
CHRNA1P02708 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.95■■□□□ 1.1
CHRNA1P02708 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CHRNA1P02708 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.95■■□□□ 1.1
CHRNA1P02708 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHRNA1P02708 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.95■■□□□ 1.1
CHRNA1P02708 AF106564.1-201ENST00000607058 2553 ntBASIC21.94■■□□□ 1.1
CHRNA1P02708 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHRNA1P02708 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHRNA1P02708 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.94■■□□□ 1.1
CHRNA1P02708 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.94■■□□□ 1.1
CHRNA1P02708 AC079834.2-201ENST00000609776 1949 ntBASIC21.94■■□□□ 1.1
CHRNA1P02708 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.94■■□□□ 1.1
CHRNA1P02708 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.94■■□□□ 1.1
CHRNA1P02708 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHRNA1P02708 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHRNA1P02708 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHRNA1P02708 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHRNA1P02708 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHRNA1P02708 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHRNA1P02708 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.94■■□□□ 1.1
CHRNA1P02708 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.94■■□□□ 1.1
CHRNA1P02708 AC073195.1-201ENST00000607241 877 ntBASIC21.94■■□□□ 1.1
CHRNA1P02708 AC010331.1-201ENST00000611423 582 ntBASIC21.94■■□□□ 1.1
CHRNA1P02708 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.94■■□□□ 1.1
CHRNA1P02708 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHRNA1P02708 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.94■■□□□ 1.1
CHRNA1P02708 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHRNA1P02708 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHRNA1P02708 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHRNA1P02708 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHRNA1P02708 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHRNA1P02708 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.94■■□□□ 1.1
CHRNA1P02708 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CHRNA1P02708 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHRNA1P02708 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHRNA1P02708 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHRNA1P02708 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHRNA1P02708 KRT8P20-201ENST00000423953 1409 ntBASIC21.93■■□□□ 1.1
CHRNA1P02708 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.93■■□□□ 1.1
CHRNA1P02708 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
CHRNA1P02708 AL031963.3-201ENST00000606441 850 ntBASIC21.93■■□□□ 1.1
CHRNA1P02708 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.93■■□□□ 1.1
CHRNA1P02708 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHRNA1P02708 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.93■■□□□ 1.1
CHRNA1P02708 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.93■■□□□ 1.1
CHRNA1P02708 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.92■■□□□ 1.1
CHRNA1P02708 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CHRNA1P02708 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA1P02708 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA1P02708 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.92■■□□□ 1.1
CHRNA1P02708 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA1P02708 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
CHRNA1P02708 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CHRNA1P02708 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.92■■□□□ 1.1
CHRNA1P02708 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA1P02708 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.92■■□□□ 1.1
CHRNA1P02708 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
CHRNA1P02708 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA1P02708 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.92■■□□□ 1.1
CHRNA1P02708 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.92■■□□□ 1.1
CHRNA1P02708 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.92■■□□□ 1.1
CHRNA1P02708 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.92■■□□□ 1.1
CHRNA1P02708 AC004264.1-201ENST00000608354 794 ntBASIC21.92■■□□□ 1.1
CHRNA1P02708 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms