Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 AP006587.3-201ENST00000525742 1516 ntBASIC15.09■□□□□ 0.01
HLA-DQA1P01909 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.09■□□□□ 0.01
HLA-DQA1P01909 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 AC010141.3-201ENST00000456659 717 ntBASIC15.09■□□□□ 0.01
HLA-DQA1P01909 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DQA1P01909 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DQA1P01909 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DQA1P01909 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DQA1P01909 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA1P01909 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA1P01909 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA1P01909 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.08■□□□□ 0
HLA-DQA1P01909 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DQA1P01909 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA1P01909 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DQA1P01909 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA1P01909 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA1P01909 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.08■□□□□ 0
HLA-DQA1P01909 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
HLA-DQA1P01909 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA1P01909 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
HLA-DQA1P01909 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA1P01909 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA1P01909 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.08■□□□□ 0
HLA-DQA1P01909 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
HLA-DQA1P01909 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA1P01909 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA1P01909 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DQA1P01909 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DQA1P01909 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA1P01909 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA1P01909 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
HLA-DQA1P01909 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA1P01909 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA1P01909 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA1P01909 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
HLA-DQA1P01909 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA1P01909 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HLA-DQA1P01909 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HLA-DQA1P01909 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA1P01909 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DQA1P01909 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA1P01909 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA1P01909 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA1P01909 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
HLA-DQA1P01909 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DQA1P01909 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.07■□□□□ 0
HLA-DQA1P01909 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA1P01909 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HLA-DQA1P01909 GUSBP5-201ENST00000418136 578 ntBASIC15.07■□□□□ 0
HLA-DQA1P01909 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DQA1P01909 UNC93B8-201ENST00000511903 705 ntBASIC15.07■□□□□ 0
HLA-DQA1P01909 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
HLA-DQA1P01909 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA1P01909 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.07■□□□□ 0
HLA-DQA1P01909 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.07■□□□□ 0
HLA-DQA1P01909 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.07■□□□□ 0
HLA-DQA1P01909 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA1P01909 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA1P01909 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DQA1P01909 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA1P01909 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA1P01909 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DQA1P01909 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA1P01909 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA1P01909 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQA1P01909 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQA1P01909 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQA1P01909 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQA1P01909 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
HLA-DQA1P01909 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQA1P01909 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.06■□□□□ 0
HLA-DQA1P01909 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
HLA-DQA1P01909 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQA1P01909 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQA1P01909 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQA1P01909 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.06■□□□□ 0
HLA-DQA1P01909 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
HLA-DQA1P01909 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQA1P01909 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms