Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 AC113347.1-201ENST00000413321 391 ntBASIC22.45■■□□□ 1.18
PGK1P00558 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.45■■□□□ 1.18
PGK1P00558 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PGK1P00558 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PGK1P00558 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PGK1P00558 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PGK1P00558 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.45■■□□□ 1.18
PGK1P00558 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.45■■□□□ 1.18
PGK1P00558 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PGK1P00558 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PGK1P00558 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PGK1P00558 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
PGK1P00558 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
PGK1P00558 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
PGK1P00558 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PGK1P00558 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.44■■□□□ 1.18
PGK1P00558 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
PGK1P00558 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.44■■□□□ 1.18
PGK1P00558 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.44■■□□□ 1.18
PGK1P00558 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.44■■□□□ 1.18
PGK1P00558 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PGK1P00558 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PGK1P00558 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.44■■□□□ 1.18
PGK1P00558 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PGK1P00558 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PGK1P00558 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.43■■□□□ 1.18
PGK1P00558 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PGK1P00558 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.43■■□□□ 1.18
PGK1P00558 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
PGK1P00558 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.43■■□□□ 1.18
PGK1P00558 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
PGK1P00558 NAPSB-206ENST00000562112 1266 ntBASIC22.43■■□□□ 1.18
PGK1P00558 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.43■■□□□ 1.18
PGK1P00558 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PGK1P00558 AC010947.1-201ENST00000623454 693 ntBASIC22.43■■□□□ 1.18
PGK1P00558 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PGK1P00558 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PGK1P00558 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.43■■□□□ 1.18
PGK1P00558 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
PGK1P00558 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.43■■□□□ 1.18
PGK1P00558 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
PGK1P00558 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PGK1P00558 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PGK1P00558 TERF1P1-201ENST00000311003 1181 ntBASIC22.42■■□□□ 1.18
PGK1P00558 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.42■■□□□ 1.18
PGK1P00558 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PGK1P00558 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.42■■□□□ 1.18
PGK1P00558 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.42■■□□□ 1.18
PGK1P00558 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
PGK1P00558 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
PGK1P00558 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PGK1P00558 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.42■■□□□ 1.18
PGK1P00558 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PGK1P00558 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PGK1P00558 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PGK1P00558 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.42■■□□□ 1.18
PGK1P00558 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PGK1P00558 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PGK1P00558 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PGK1P00558 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PGK1P00558 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
PGK1P00558 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.41■■□□□ 1.18
PGK1P00558 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PGK1P00558 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PGK1P00558 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.41■■□□□ 1.18
PGK1P00558 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PGK1P00558 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.41■■□□□ 1.18
PGK1P00558 AC116562.2-201ENST00000507042 360 ntBASIC22.41■■□□□ 1.18
PGK1P00558 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.41■■□□□ 1.18
PGK1P00558 FITM1-202ENST00000559294 800 ntBASIC22.41■■□□□ 1.18
PGK1P00558 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.41■■□□□ 1.18
PGK1P00558 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.41■■□□□ 1.18
PGK1P00558 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PGK1P00558 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.41■■□□□ 1.18
PGK1P00558 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.41■■□□□ 1.18
PGK1P00558 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PGK1P00558 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PGK1P00558 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.4■■□□□ 1.18
PGK1P00558 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.4■■□□□ 1.18
PGK1P00558 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
PGK1P00558 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.4■■□□□ 1.18
PGK1P00558 KRT18P22-201ENST00000402024 1347 ntBASIC22.4■■□□□ 1.18
PGK1P00558 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
PGK1P00558 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PGK1P00558 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.4■■□□□ 1.18
PGK1P00558 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
PGK1P00558 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
PGK1P00558 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.4■■□□□ 1.18
PGK1P00558 NIFKP9-201ENST00000419265 221 ntBASIC22.4■■□□□ 1.18
PGK1P00558 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.4■■□□□ 1.18
PGK1P00558 AL137013.1-201ENST00000432946 1228 ntBASIC22.4■■□□□ 1.18
PGK1P00558 KSR1P1-201ENST00000446298 240 ntBASIC22.4■■□□□ 1.18
PGK1P00558 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.4■■□□□ 1.18
PGK1P00558 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.4■■□□□ 1.18
PGK1P00558 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.4■■□□□ 1.18
PGK1P00558 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.4■■□□□ 1.18
PGK1P00558 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PGK1P00558 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.4■■□□□ 1.18
PGK1P00558 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.4■■□□□ 1.18
PGK1P00558 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms