Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
VAPBO95292 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VAPBO95292 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
VAPBO95292 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VAPBO95292 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
VAPBO95292 KRT18P68-201ENST00000392293 1000 ntBASIC20.16■□□□□ 0.82
VAPBO95292 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
VAPBO95292 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VAPBO95292 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.16■□□□□ 0.82
VAPBO95292 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.16■□□□□ 0.82
VAPBO95292 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
VAPBO95292 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
VAPBO95292 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.16■□□□□ 0.82
VAPBO95292 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VAPBO95292 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.16■□□□□ 0.82
VAPBO95292 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
VAPBO95292 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
VAPBO95292 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VAPBO95292 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VAPBO95292 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.15■□□□□ 0.82
VAPBO95292 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VAPBO95292 RNF165-205ENST00000588679 2904 ntBASIC20.15■□□□□ 0.82
VAPBO95292 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VAPBO95292 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
VAPBO95292 AL355472.2-201ENST00000422958 438 ntBASIC20.15■□□□□ 0.82
VAPBO95292 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.15■□□□□ 0.82
VAPBO95292 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.15■□□□□ 0.82
VAPBO95292 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VAPBO95292 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VAPBO95292 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.15■□□□□ 0.82
VAPBO95292 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
VAPBO95292 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.15■□□□□ 0.82
VAPBO95292 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VAPBO95292 BX119927.1-201ENST00000636596 1552 ntBASIC20.15■□□□□ 0.82
VAPBO95292 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
VAPBO95292 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VAPBO95292 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VAPBO95292 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VAPBO95292 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.15■□□□□ 0.82
VAPBO95292 AL691432.2-201ENST00000607222 2038 ntBASIC20.15■□□□□ 0.82
VAPBO95292 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
VAPBO95292 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
VAPBO95292 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
VAPBO95292 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VAPBO95292 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
VAPBO95292 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VAPBO95292 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.14■□□□□ 0.81
VAPBO95292 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.14■□□□□ 0.81
VAPBO95292 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
VAPBO95292 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VAPBO95292 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
VAPBO95292 CYP2T3P-201ENST00000601990 817 ntBASIC20.14■□□□□ 0.81
VAPBO95292 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.14■□□□□ 0.81
VAPBO95292 AC005181.1-201ENST00000604782 1256 ntBASIC20.14■□□□□ 0.81
VAPBO95292 AC080038.1-201ENST00000611274 1154 ntBASIC20.14■□□□□ 0.81
VAPBO95292 AC105020.6-201ENST00000621523 1217 ntBASIC20.14■□□□□ 0.81
VAPBO95292 OR10C1-204ENST00000622521 1039 ntBASIC20.14■□□□□ 0.81
VAPBO95292 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VAPBO95292 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
VAPBO95292 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
VAPBO95292 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
VAPBO95292 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.14■□□□□ 0.81
VAPBO95292 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
VAPBO95292 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
VAPBO95292 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
VAPBO95292 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.13■□□□□ 0.81
VAPBO95292 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VAPBO95292 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
VAPBO95292 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
VAPBO95292 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
VAPBO95292 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VAPBO95292 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VAPBO95292 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
VAPBO95292 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VAPBO95292 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
VAPBO95292 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.13■□□□□ 0.81
VAPBO95292 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.13■□□□□ 0.81
VAPBO95292 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
VAPBO95292 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VAPBO95292 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
VAPBO95292 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.13■□□□□ 0.81
VAPBO95292 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VAPBO95292 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.12■□□□□ 0.81
VAPBO95292 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VAPBO95292 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.12■□□□□ 0.81
VAPBO95292 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.12■□□□□ 0.81
VAPBO95292 AC010980.2-201ENST00000587099 1412 ntBASIC20.12■□□□□ 0.81
VAPBO95292 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VAPBO95292 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VAPBO95292 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VAPBO95292 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.12■□□□□ 0.81
VAPBO95292 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
VAPBO95292 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VAPBO95292 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.12■□□□□ 0.81
VAPBO95292 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
VAPBO95292 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VAPBO95292 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VAPBO95292 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VAPBO95292 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.12■□□□□ 0.81
VAPBO95292 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms