Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
BEST1O76090 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BEST1O76090 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BEST1O76090 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BEST1O76090 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.13■□□□□ 0.97
BEST1O76090 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BEST1O76090 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BEST1O76090 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.13■□□□□ 0.97
BEST1O76090 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
BEST1O76090 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BEST1O76090 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BEST1O76090 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.13■□□□□ 0.97
BEST1O76090 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BEST1O76090 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.13■□□□□ 0.97
BEST1O76090 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.13■□□□□ 0.97
BEST1O76090 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.13■□□□□ 0.97
BEST1O76090 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.13■□□□□ 0.97
BEST1O76090 KRT8P20-201ENST00000423953 1409 ntBASIC21.12■□□□□ 0.97
BEST1O76090 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
BEST1O76090 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BEST1O76090 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
BEST1O76090 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
BEST1O76090 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
BEST1O76090 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BEST1O76090 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
BEST1O76090 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
BEST1O76090 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.12■□□□□ 0.97
BEST1O76090 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.12■□□□□ 0.97
BEST1O76090 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.12■□□□□ 0.97
BEST1O76090 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BEST1O76090 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.12■□□□□ 0.97
BEST1O76090 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BEST1O76090 AC069544.1-201ENST00000609399 999 ntBASIC21.12■□□□□ 0.97
BEST1O76090 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
BEST1O76090 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.12■□□□□ 0.97
BEST1O76090 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
BEST1O76090 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
BEST1O76090 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
BEST1O76090 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BEST1O76090 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
BEST1O76090 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.11■□□□□ 0.97
BEST1O76090 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BEST1O76090 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
BEST1O76090 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BEST1O76090 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
BEST1O76090 KRT17P3-201ENST00000420566 1262 ntBASIC21.11■□□□□ 0.97
BEST1O76090 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BEST1O76090 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.11■□□□□ 0.97
BEST1O76090 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.11■□□□□ 0.97
BEST1O76090 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.11■□□□□ 0.97
BEST1O76090 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BEST1O76090 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.11■□□□□ 0.97
BEST1O76090 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
BEST1O76090 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.11■□□□□ 0.97
BEST1O76090 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BEST1O76090 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BEST1O76090 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.11■□□□□ 0.97
BEST1O76090 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
BEST1O76090 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BEST1O76090 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BEST1O76090 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.11■□□□□ 0.97
BEST1O76090 AL391422.3-201ENST00000603791 2761 ntBASIC21.1■□□□□ 0.97
BEST1O76090 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
BEST1O76090 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BEST1O76090 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BEST1O76090 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BEST1O76090 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BEST1O76090 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BEST1O76090 GABARAPL3-202ENST00000624044 1851 ntBASIC21.1■□□□□ 0.97
BEST1O76090 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BEST1O76090 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.1■□□□□ 0.97
BEST1O76090 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BEST1O76090 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BEST1O76090 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
BEST1O76090 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.1■□□□□ 0.97
BEST1O76090 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.1■□□□□ 0.97
BEST1O76090 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.1■□□□□ 0.97
BEST1O76090 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.1■□□□□ 0.97
BEST1O76090 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BEST1O76090 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BEST1O76090 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
BEST1O76090 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
BEST1O76090 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
BEST1O76090 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BEST1O76090 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.1■□□□□ 0.97
BEST1O76090 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BEST1O76090 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
BEST1O76090 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.09■□□□□ 0.97
BEST1O76090 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.09■□□□□ 0.97
BEST1O76090 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BEST1O76090 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BEST1O76090 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
BEST1O76090 HLA-G-202ENST00000376815 851 ntBASIC21.09■□□□□ 0.97
BEST1O76090 HLA-G-203ENST00000376818 1127 ntBASIC21.09■□□□□ 0.97
BEST1O76090 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
BEST1O76090 RPS2P52-201ENST00000469610 820 ntBASIC21.09■□□□□ 0.97
BEST1O76090 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.09■□□□□ 0.97
BEST1O76090 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.09■□□□□ 0.97
BEST1O76090 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.09■□□□□ 0.97
BEST1O76090 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms