Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.26■□□□□ 0.67
SNRNP200O75643 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SNRNP200O75643 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNRNP200O75643 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNRNP200O75643 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNRNP200O75643 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP200O75643 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP200O75643 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP200O75643 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP200O75643 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP200O75643 KRT17P3-201ENST00000420566 1262 ntBASIC19.25■□□□□ 0.67
SNRNP200O75643 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.25■□□□□ 0.67
SNRNP200O75643 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.25■□□□□ 0.67
SNRNP200O75643 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP200O75643 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP200O75643 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP200O75643 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SNRNP200O75643 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.25■□□□□ 0.67
SNRNP200O75643 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP200O75643 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.25■□□□□ 0.67
SNRNP200O75643 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SNRNP200O75643 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP200O75643 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP200O75643 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.25■□□□□ 0.67
SNRNP200O75643 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SNRNP200O75643 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP200O75643 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP200O75643 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP200O75643 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SNRNP200O75643 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP200O75643 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP200O75643 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.24■□□□□ 0.67
SNRNP200O75643 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP200O75643 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP200O75643 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.24■□□□□ 0.67
SNRNP200O75643 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP200O75643 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.24■□□□□ 0.67
SNRNP200O75643 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP200O75643 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SNRNP200O75643 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SNRNP200O75643 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SNRNP200O75643 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP200O75643 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP200O75643 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.24■□□□□ 0.67
SNRNP200O75643 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP200O75643 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SNRNP200O75643 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP200O75643 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SNRNP200O75643 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.24■□□□□ 0.67
SNRNP200O75643 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SNRNP200O75643 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP200O75643 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.24■□□□□ 0.67
SNRNP200O75643 AL031963.3-201ENST00000606441 850 ntBASIC19.24■□□□□ 0.67
SNRNP200O75643 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP200O75643 AL121906.2-201ENST00000621597 723 ntBASIC19.24■□□□□ 0.67
SNRNP200O75643 AC066615.1-201ENST00000640911 628 ntBASIC19.24■□□□□ 0.67
SNRNP200O75643 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP200O75643 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP200O75643 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP200O75643 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP200O75643 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.23■□□□□ 0.67
SNRNP200O75643 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.23■□□□□ 0.67
SNRNP200O75643 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP200O75643 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP200O75643 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.23■□□□□ 0.67
SNRNP200O75643 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.23■□□□□ 0.67
SNRNP200O75643 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.23■□□□□ 0.67
SNRNP200O75643 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.23■□□□□ 0.67
SNRNP200O75643 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP200O75643 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP200O75643 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP200O75643 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP200O75643 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SNRNP200O75643 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP200O75643 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP200O75643 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP200O75643 FAM201B-201ENST00000458407 597 ntBASIC19.22■□□□□ 0.67
SNRNP200O75643 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.22■□□□□ 0.67
SNRNP200O75643 MTDHP1-201ENST00000605323 784 ntBASIC19.22■□□□□ 0.67
SNRNP200O75643 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SNRNP200O75643 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNRNP200O75643 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
SNRNP200O75643 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNRNP200O75643 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNRNP200O75643 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNRNP200O75643 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNRNP200O75643 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNRNP200O75643 GCSHP5-201ENST00000443090 522 ntBASIC19.22■□□□□ 0.67
SNRNP200O75643 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.22■□□□□ 0.67
SNRNP200O75643 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNRNP200O75643 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.22■□□□□ 0.67
SNRNP200O75643 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNRNP200O75643 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNRNP200O75643 BX119927.1-201ENST00000636596 1552 ntBASIC19.21■□□□□ 0.67
SNRNP200O75643 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP200O75643 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP200O75643 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP200O75643 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.21■□□□□ 0.67
SNRNP200O75643 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.21■□□□□ 0.67
SNRNP200O75643 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms