Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.34■□□□□ 0.69
PRAMEF4O60810 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.34■□□□□ 0.69
PRAMEF4O60810 AC006970.2-201ENST00000450065 779 ntBASIC19.34■□□□□ 0.69
PRAMEF4O60810 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.34■□□□□ 0.69
PRAMEF4O60810 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PRAMEF4O60810 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEF4O60810 AL121832.2-201ENST00000610979 668 ntBASIC19.34■□□□□ 0.69
PRAMEF4O60810 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.34■□□□□ 0.69
PRAMEF4O60810 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEF4O60810 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.34■□□□□ 0.69
PRAMEF4O60810 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEF4O60810 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEF4O60810 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.33■□□□□ 0.69
PRAMEF4O60810 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.33■□□□□ 0.69
PRAMEF4O60810 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRAMEF4O60810 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
PRAMEF4O60810 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRAMEF4O60810 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF4O60810 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.33■□□□□ 0.68
PRAMEF4O60810 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PRAMEF4O60810 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF4O60810 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.33■□□□□ 0.68
PRAMEF4O60810 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF4O60810 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF4O60810 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF4O60810 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PRAMEF4O60810 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF4O60810 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF4O60810 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.33■□□□□ 0.68
PRAMEF4O60810 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF4O60810 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF4O60810 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF4O60810 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF4O60810 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEF4O60810 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF4O60810 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF4O60810 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEF4O60810 LSM12P1-201ENST00000411836 588 ntBASIC19.32■□□□□ 0.68
PRAMEF4O60810 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.32■□□□□ 0.68
PRAMEF4O60810 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.32■□□□□ 0.68
PRAMEF4O60810 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF4O60810 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF4O60810 KRT8P17-201ENST00000453110 1448 ntBASIC19.32■□□□□ 0.68
PRAMEF4O60810 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF4O60810 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEF4O60810 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF4O60810 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEF4O60810 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF4O60810 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PRAMEF4O60810 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.31■□□□□ 0.68
PRAMEF4O60810 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF4O60810 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF4O60810 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.31■□□□□ 0.68
PRAMEF4O60810 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF4O60810 PKD1P6-201ENST00000343738 4769 ntBASIC19.31■□□□□ 0.68
PRAMEF4O60810 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PRAMEF4O60810 GPX1P1-201ENST00000388829 606 ntBASIC19.31■□□□□ 0.68
PRAMEF4O60810 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.31■□□□□ 0.68
PRAMEF4O60810 TSPY6P-201ENST00000448518 926 ntBASIC19.31■□□□□ 0.68
PRAMEF4O60810 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.31■□□□□ 0.68
PRAMEF4O60810 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.31■□□□□ 0.68
PRAMEF4O60810 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF4O60810 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.31■□□□□ 0.68
PRAMEF4O60810 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.31■□□□□ 0.68
PRAMEF4O60810 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.31■□□□□ 0.68
PRAMEF4O60810 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PRAMEF4O60810 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.31■□□□□ 0.68
PRAMEF4O60810 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF4O60810 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF4O60810 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.31■□□□□ 0.68
PRAMEF4O60810 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF4O60810 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
PRAMEF4O60810 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF4O60810 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
PRAMEF4O60810 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF4O60810 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF4O60810 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF4O60810 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.3■□□□□ 0.68
PRAMEF4O60810 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PRAMEF4O60810 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAMEF4O60810 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF4O60810 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF4O60810 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF4O60810 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF4O60810 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.3■□□□□ 0.68
PRAMEF4O60810 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAMEF4O60810 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PRAMEF4O60810 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAMEF4O60810 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.3■□□□□ 0.68
PRAMEF4O60810 AL031963.3-201ENST00000606441 850 ntBASIC19.3■□□□□ 0.68
PRAMEF4O60810 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.3■□□□□ 0.68
PRAMEF4O60810 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.3■□□□□ 0.68
PRAMEF4O60810 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.3■□□□□ 0.68
PRAMEF4O60810 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PRAMEF4O60810 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF4O60810 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PRAMEF4O60810 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF4O60810 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PRAMEF4O60810 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF4O60810 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms