Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PAX4O43316 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PAX4O43316 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.31□□□□□ -0.12
PAX4O43316 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PAX4O43316 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.31□□□□□ -0.12
PAX4O43316 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
PAX4O43316 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX4O43316 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.31□□□□□ -0.12
PAX4O43316 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.31□□□□□ -0.12
PAX4O43316 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX4O43316 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.31□□□□□ -0.12
PAX4O43316 AC105036.2-201ENST00000569468 176 ntBASIC14.31□□□□□ -0.12
PAX4O43316 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.31□□□□□ -0.12
PAX4O43316 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
PAX4O43316 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PAX4O43316 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PAX4O43316 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX4O43316 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX4O43316 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PAX4O43316 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.31□□□□□ -0.12
PAX4O43316 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PAX4O43316 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PAX4O43316 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
PAX4O43316 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX4O43316 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PAX4O43316 AC087633.2-202ENST00000565166 1439 ntBASIC14.31□□□□□ -0.12
PAX4O43316 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX4O43316 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PAX4O43316 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
PAX4O43316 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX4O43316 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX4O43316 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX4O43316 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PAX4O43316 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PAX4O43316 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX4O43316 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.3□□□□□ -0.12
PAX4O43316 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PAX4O43316 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PAX4O43316 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.3□□□□□ -0.12
PAX4O43316 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.3□□□□□ -0.12
PAX4O43316 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX4O43316 AL512625.2-201ENST00000417533 625 ntBASIC14.3□□□□□ -0.12
PAX4O43316 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.3□□□□□ -0.12
PAX4O43316 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.3□□□□□ -0.12
PAX4O43316 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.3□□□□□ -0.12
PAX4O43316 AC133552.2-202ENST00000575694 574 ntBASIC14.3□□□□□ -0.12
PAX4O43316 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX4O43316 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX4O43316 AL356652.1-201ENST00000615962 565 ntBASIC14.3□□□□□ -0.12
PAX4O43316 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX4O43316 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.3□□□□□ -0.12
PAX4O43316 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX4O43316 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PAX4O43316 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PAX4O43316 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.3□□□□□ -0.12
PAX4O43316 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PAX4O43316 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.29□□□□□ -0.12
PAX4O43316 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PAX4O43316 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.29□□□□□ -0.12
PAX4O43316 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PAX4O43316 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PAX4O43316 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PAX4O43316 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX4O43316 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PAX4O43316 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PAX4O43316 KRT18P68-201ENST00000392293 1000 ntBASIC14.29□□□□□ -0.12
PAX4O43316 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.29□□□□□ -0.12
PAX4O43316 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.29□□□□□ -0.12
PAX4O43316 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX4O43316 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PAX4O43316 AC092720.2-201ENST00000602388 1665 ntBASIC14.29□□□□□ -0.12
PAX4O43316 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX4O43316 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX4O43316 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.29□□□□□ -0.12
PAX4O43316 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
PAX4O43316 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX4O43316 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX4O43316 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.29□□□□□ -0.12
PAX4O43316 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX4O43316 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX4O43316 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PAX4O43316 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX4O43316 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX4O43316 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX4O43316 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX4O43316 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX4O43316 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX4O43316 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX4O43316 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX4O43316 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.28□□□□□ -0.12
PAX4O43316 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX4O43316 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PAX4O43316 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX4O43316 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PAX4O43316 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PAX4O43316 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX4O43316 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.28□□□□□ -0.12
PAX4O43316 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.28□□□□□ -0.12
PAX4O43316 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.28□□□□□ -0.12
PAX4O43316 CROCCP5-201ENST00000436658 830 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms