Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CDX4O14627 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDX4O14627 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDX4O14627 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDX4O14627 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDX4O14627 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.48■□□□□ 0.71
CDX4O14627 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.48■□□□□ 0.71
CDX4O14627 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDX4O14627 KRT126P-201ENST00000549467 1181 ntBASIC19.48■□□□□ 0.71
CDX4O14627 LINC01238-205ENST00000567549 1107 ntBASIC19.48■□□□□ 0.71
CDX4O14627 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.48■□□□□ 0.71
CDX4O14627 MYC-208ENST00000641036 567 ntBASIC19.48■□□□□ 0.71
CDX4O14627 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDX4O14627 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CDX4O14627 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDX4O14627 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CDX4O14627 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDX4O14627 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.48■□□□□ 0.71
CDX4O14627 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDX4O14627 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.48■□□□□ 0.71
CDX4O14627 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDX4O14627 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDX4O14627 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDX4O14627 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDX4O14627 INGX-201ENST00000359239 846 ntBASIC19.47■□□□□ 0.71
CDX4O14627 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDX4O14627 TPM4P1-201ENST00000436100 807 ntBASIC19.47■□□□□ 0.71
CDX4O14627 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.47■□□□□ 0.71
CDX4O14627 KRT18P56-201ENST00000507275 550 ntBASIC19.47■□□□□ 0.71
CDX4O14627 FAM87A-204ENST00000613235 858 ntBASIC19.47■□□□□ 0.71
CDX4O14627 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.47■□□□□ 0.71
CDX4O14627 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDX4O14627 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDX4O14627 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDX4O14627 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDX4O14627 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDX4O14627 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDX4O14627 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDX4O14627 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDX4O14627 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CDX4O14627 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDX4O14627 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDX4O14627 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDX4O14627 CRYGFP-201ENST00000418459 633 ntBASIC19.46■□□□□ 0.71
CDX4O14627 AC117947.1-201ENST00000427448 529 ntBASIC19.46■□□□□ 0.71
CDX4O14627 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CDX4O14627 AC091390.4-202ENST00000476426 537 ntBASIC19.46■□□□□ 0.71
CDX4O14627 AC128688.1-201ENST00000487626 519 ntBASIC19.46■□□□□ 0.71
CDX4O14627 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CDX4O14627 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.46■□□□□ 0.71
CDX4O14627 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
CDX4O14627 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDX4O14627 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDX4O14627 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.46■□□□□ 0.71
CDX4O14627 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.46■□□□□ 0.71
CDX4O14627 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDX4O14627 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.46■□□□□ 0.71
CDX4O14627 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.45■□□□□ 0.7
CDX4O14627 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDX4O14627 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDX4O14627 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.45■□□□□ 0.7
CDX4O14627 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDX4O14627 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDX4O14627 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDX4O14627 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDX4O14627 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.45■□□□□ 0.7
CDX4O14627 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDX4O14627 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.45■□□□□ 0.7
CDX4O14627 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.45■□□□□ 0.7
CDX4O14627 AL031133.1-201ENST00000406807 723 ntBASIC19.45■□□□□ 0.7
CDX4O14627 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDX4O14627 B3GAT3P1-201ENST00000471720 806 ntBASIC19.45■□□□□ 0.7
CDX4O14627 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.45■□□□□ 0.7
CDX4O14627 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
CDX4O14627 AC026271.3-201ENST00000571884 352 ntBASIC19.45■□□□□ 0.7
CDX4O14627 DGCR10-201ENST00000609839 495 ntBASIC19.45■□□□□ 0.7
CDX4O14627 MIR2861-201ENST00000636310 90 ntBASIC19.45■□□□□ 0.7
CDX4O14627 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.45■□□□□ 0.7
CDX4O14627 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.45■□□□□ 0.7
CDX4O14627 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDX4O14627 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.44■□□□□ 0.7
CDX4O14627 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDX4O14627 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.44■□□□□ 0.7
CDX4O14627 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.44■□□□□ 0.7
CDX4O14627 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.44■□□□□ 0.7
CDX4O14627 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDX4O14627 FAM8A6P-201ENST00000407496 1135 ntBASIC19.44■□□□□ 0.7
CDX4O14627 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.44■□□□□ 0.7
CDX4O14627 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.44■□□□□ 0.7
CDX4O14627 AC011506.1-201ENST00000474329 610 ntBASIC19.44■□□□□ 0.7
CDX4O14627 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.44■□□□□ 0.7
CDX4O14627 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDX4O14627 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.44■□□□□ 0.7
CDX4O14627 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.44■□□□□ 0.7
CDX4O14627 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.44■□□□□ 0.7
CDX4O14627 AL445675.2-201ENST00000620291 557 ntBASIC19.44■□□□□ 0.7
CDX4O14627 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CDX4O14627 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.44■□□□□ 0.7
CDX4O14627 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDX4O14627 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms