Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.04■□□□□ 0.8
COPEO14579 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPEO14579 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COPEO14579 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
COPEO14579 AC104187.1-201ENST00000607510 612 ntBASIC20.04■□□□□ 0.8
COPEO14579 FAM21FP-204ENST00000608637 956 ntBASIC20.04■□□□□ 0.8
COPEO14579 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.04■□□□□ 0.8
COPEO14579 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COPEO14579 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
COPEO14579 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
COPEO14579 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.04■□□□□ 0.8
COPEO14579 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPEO14579 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.04■□□□□ 0.8
COPEO14579 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COPEO14579 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPEO14579 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.03■□□□□ 0.8
COPEO14579 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COPEO14579 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPEO14579 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
COPEO14579 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.03■□□□□ 0.8
COPEO14579 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPEO14579 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPEO14579 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPEO14579 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPEO14579 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COPEO14579 AC091799.1-201ENST00000422823 811 ntBASIC20.03■□□□□ 0.8
COPEO14579 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.03■□□□□ 0.8
COPEO14579 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.03■□□□□ 0.8
COPEO14579 AP001160.3-201ENST00000601484 763 ntBASIC20.03■□□□□ 0.8
COPEO14579 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.03■□□□□ 0.8
COPEO14579 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPEO14579 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
COPEO14579 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COPEO14579 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.03■□□□□ 0.8
COPEO14579 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COPEO14579 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.03■□□□□ 0.8
COPEO14579 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
COPEO14579 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
COPEO14579 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.02■□□□□ 0.8
COPEO14579 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
COPEO14579 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
COPEO14579 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
COPEO14579 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COPEO14579 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.02■□□□□ 0.8
COPEO14579 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.02■□□□□ 0.8
COPEO14579 CCDC92B-201ENST00000575506 885 ntBASIC20.02■□□□□ 0.8
COPEO14579 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.02■□□□□ 0.8
COPEO14579 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COPEO14579 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
COPEO14579 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COPEO14579 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.02■□□□□ 0.8
COPEO14579 TREX1-205ENST00000625293 1783 ntBASIC20.02■□□□□ 0.8
COPEO14579 AC093484.2-201ENST00000580996 2166 ntBASIC20.02■□□□□ 0.8
COPEO14579 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COPEO14579 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COPEO14579 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
COPEO14579 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
COPEO14579 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.02■□□□□ 0.79
COPEO14579 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COPEO14579 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.01■□□□□ 0.79
COPEO14579 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPEO14579 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPEO14579 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.01■□□□□ 0.79
COPEO14579 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPEO14579 SUDS3P1-201ENST00000505831 966 ntBASIC20.01■□□□□ 0.79
COPEO14579 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.01■□□□□ 0.79
COPEO14579 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.01■□□□□ 0.79
COPEO14579 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COPEO14579 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.01■□□□□ 0.79
COPEO14579 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
COPEO14579 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.01■□□□□ 0.79
COPEO14579 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPEO14579 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.01■□□□□ 0.79
COPEO14579 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
COPEO14579 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPEO14579 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPEO14579 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20■□□□□ 0.79
COPEO14579 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
COPEO14579 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COPEO14579 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20■□□□□ 0.79
COPEO14579 TNXA-203ENST00000507684 2038 ntBASIC20■□□□□ 0.79
COPEO14579 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
COPEO14579 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COPEO14579 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
COPEO14579 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20■□□□□ 0.79
COPEO14579 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COPEO14579 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
COPEO14579 AC105265.2-201ENST00000467189 838 ntBASIC20■□□□□ 0.79
COPEO14579 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20■□□□□ 0.79
COPEO14579 AC243732.1-201ENST00000612648 864 ntBASIC20■□□□□ 0.79
COPEO14579 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
COPEO14579 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COPEO14579 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COPEO14579 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COPEO14579 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20■□□□□ 0.79
COPEO14579 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
COPEO14579 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20■□□□□ 0.79
COPEO14579 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20■□□□□ 0.79
COPEO14579 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COPEO14579 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms