Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBFD1O14562 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBFD1O14562 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
UBFD1O14562 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
UBFD1O14562 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
UBFD1O14562 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBFD1O14562 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBFD1O14562 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBFD1O14562 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBFD1O14562 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.48■□□□□ 0.71
UBFD1O14562 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBFD1O14562 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
UBFD1O14562 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBFD1O14562 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.48■□□□□ 0.71
UBFD1O14562 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.48■□□□□ 0.71
UBFD1O14562 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.48■□□□□ 0.71
UBFD1O14562 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.48■□□□□ 0.71
UBFD1O14562 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
UBFD1O14562 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBFD1O14562 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBFD1O14562 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.48■□□□□ 0.71
UBFD1O14562 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBFD1O14562 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.47■□□□□ 0.71
UBFD1O14562 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBFD1O14562 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
UBFD1O14562 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.47■□□□□ 0.71
UBFD1O14562 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBFD1O14562 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBFD1O14562 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBFD1O14562 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBFD1O14562 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBFD1O14562 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.47■□□□□ 0.71
UBFD1O14562 AC034268.1-201ENST00000441047 882 ntBASIC19.47■□□□□ 0.71
UBFD1O14562 AC007322.4-201ENST00000509611 723 ntBASIC19.47■□□□□ 0.71
UBFD1O14562 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBFD1O14562 AL162412.1-201ENST00000567129 965 ntBASIC19.47■□□□□ 0.71
UBFD1O14562 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.47■□□□□ 0.71
UBFD1O14562 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
UBFD1O14562 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBFD1O14562 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBFD1O14562 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
UBFD1O14562 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.47■□□□□ 0.71
UBFD1O14562 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBFD1O14562 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBFD1O14562 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.47■□□□□ 0.71
UBFD1O14562 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.47■□□□□ 0.71
UBFD1O14562 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBFD1O14562 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.46■□□□□ 0.71
UBFD1O14562 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBFD1O14562 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBFD1O14562 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBFD1O14562 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBFD1O14562 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBFD1O14562 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBFD1O14562 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.46■□□□□ 0.71
UBFD1O14562 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.46■□□□□ 0.71
UBFD1O14562 AC087623.3-201ENST00000607047 1098 ntBASIC19.46■□□□□ 0.71
UBFD1O14562 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.46■□□□□ 0.71
UBFD1O14562 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBFD1O14562 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBFD1O14562 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBFD1O14562 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.46■□□□□ 0.71
UBFD1O14562 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBFD1O14562 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.46■□□□□ 0.71
UBFD1O14562 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBFD1O14562 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBFD1O14562 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBFD1O14562 RNF165-205ENST00000588679 2904 ntBASIC19.45■□□□□ 0.7
UBFD1O14562 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBFD1O14562 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
UBFD1O14562 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.45■□□□□ 0.7
UBFD1O14562 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.45■□□□□ 0.7
UBFD1O14562 AC093484.2-201ENST00000580996 2166 ntBASIC19.45■□□□□ 0.7
UBFD1O14562 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.45■□□□□ 0.7
UBFD1O14562 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBFD1O14562 AC013268.1-206ENST00000638368 961 ntBASIC19.45■□□□□ 0.7
UBFD1O14562 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.45■□□□□ 0.7
UBFD1O14562 AC112229.1-201ENST00000639295 961 ntBASIC19.45■□□□□ 0.7
UBFD1O14562 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.45■□□□□ 0.7
UBFD1O14562 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBFD1O14562 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
UBFD1O14562 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBFD1O14562 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBFD1O14562 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBFD1O14562 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
UBFD1O14562 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBFD1O14562 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.44■□□□□ 0.7
UBFD1O14562 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBFD1O14562 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBFD1O14562 AC098818.2-201ENST00000564925 2320 ntBASIC19.44■□□□□ 0.7
UBFD1O14562 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBFD1O14562 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBFD1O14562 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBFD1O14562 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBFD1O14562 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBFD1O14562 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.44■□□□□ 0.7
UBFD1O14562 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.44■□□□□ 0.7
UBFD1O14562 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.44■□□□□ 0.7
UBFD1O14562 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.44■□□□□ 0.7
UBFD1O14562 MFSD11-216ENST00000590393 1141 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms