Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.11■□□□□ 0.17
UPK2O00526 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK2O00526 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.11■□□□□ 0.17
UPK2O00526 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.11■□□□□ 0.17
UPK2O00526 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.11■□□□□ 0.17
UPK2O00526 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK2O00526 AC016405.3-201ENST00000607710 860 ntBASIC16.11■□□□□ 0.17
UPK2O00526 MIR6821-201ENST00000617625 74 ntBASIC16.11■□□□□ 0.17
UPK2O00526 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
UPK2O00526 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.11■□□□□ 0.17
UPK2O00526 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
UPK2O00526 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK2O00526 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.1■□□□□ 0.17
UPK2O00526 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK2O00526 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK2O00526 AC125437.2-201ENST00000625180 2167 ntBASIC16.1■□□□□ 0.17
UPK2O00526 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK2O00526 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.1■□□□□ 0.17
UPK2O00526 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK2O00526 AC137761.2-201ENST00000561729 223 ntBASIC16.1■□□□□ 0.17
UPK2O00526 AC145350.3-201ENST00000569033 163 ntBASIC16.1■□□□□ 0.17
UPK2O00526 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UPK2O00526 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK2O00526 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK2O00526 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK2O00526 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK2O00526 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UPK2O00526 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.1■□□□□ 0.17
UPK2O00526 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.1■□□□□ 0.17
UPK2O00526 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
UPK2O00526 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK2O00526 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UPK2O00526 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.1■□□□□ 0.17
UPK2O00526 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.1■□□□□ 0.17
UPK2O00526 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UPK2O00526 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UPK2O00526 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.09■□□□□ 0.17
UPK2O00526 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.09■□□□□ 0.17
UPK2O00526 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.09■□□□□ 0.17
UPK2O00526 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK2O00526 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK2O00526 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.09■□□□□ 0.17
UPK2O00526 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.09■□□□□ 0.17
UPK2O00526 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.09■□□□□ 0.17
UPK2O00526 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UPK2O00526 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
UPK2O00526 AC087623.3-201ENST00000607047 1098 ntBASIC16.09■□□□□ 0.17
UPK2O00526 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.09■□□□□ 0.17
UPK2O00526 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK2O00526 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK2O00526 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK2O00526 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK2O00526 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
UPK2O00526 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK2O00526 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK2O00526 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.09■□□□□ 0.17
UPK2O00526 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.09■□□□□ 0.17
UPK2O00526 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK2O00526 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK2O00526 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK2O00526 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
UPK2O00526 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
UPK2O00526 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
UPK2O00526 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
UPK2O00526 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UPK2O00526 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UPK2O00526 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UPK2O00526 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UPK2O00526 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
UPK2O00526 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK2O00526 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.08■□□□□ 0.16
UPK2O00526 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.08■□□□□ 0.16
UPK2O00526 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.08■□□□□ 0.16
UPK2O00526 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.08■□□□□ 0.16
UPK2O00526 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.08■□□□□ 0.16
UPK2O00526 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UPK2O00526 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.08■□□□□ 0.16
UPK2O00526 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
UPK2O00526 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UPK2O00526 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK2O00526 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UPK2O00526 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK2O00526 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK2O00526 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms