Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.42■□□□□ 0.06
NDUFA4O00483 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NDUFA4O00483 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 AL031963.3-201ENST00000606441 850 ntBASIC15.42■□□□□ 0.06
NDUFA4O00483 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.42■□□□□ 0.06
NDUFA4O00483 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.42■□□□□ 0.06
NDUFA4O00483 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 KRT8P20-201ENST00000423953 1409 ntBASIC15.42■□□□□ 0.06
NDUFA4O00483 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA4O00483 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA4O00483 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA4O00483 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NDUFA4O00483 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NDUFA4O00483 AC073130.3-201ENST00000624389 2278 ntBASIC15.41■□□□□ 0.06
NDUFA4O00483 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA4O00483 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA4O00483 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NDUFA4O00483 MIPEPP3-201ENST00000412105 444 ntBASIC15.41■□□□□ 0.06
NDUFA4O00483 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.41■□□□□ 0.06
NDUFA4O00483 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.41■□□□□ 0.06
NDUFA4O00483 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
NDUFA4O00483 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.41■□□□□ 0.06
NDUFA4O00483 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA4O00483 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.41■□□□□ 0.06
NDUFA4O00483 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.41■□□□□ 0.06
NDUFA4O00483 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.41■□□□□ 0.06
NDUFA4O00483 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NDUFA4O00483 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA4O00483 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA4O00483 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.41■□□□□ 0.06
NDUFA4O00483 KRT8P17-201ENST00000453110 1448 ntBASIC15.41■□□□□ 0.06
NDUFA4O00483 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
NDUFA4O00483 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA4O00483 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.41■□□□□ 0.06
NDUFA4O00483 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.41■□□□□ 0.06
NDUFA4O00483 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.41■□□□□ 0.06
NDUFA4O00483 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NDUFA4O00483 BX119927.1-201ENST00000636596 1552 ntBASIC15.41■□□□□ 0.06
NDUFA4O00483 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA4O00483 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
NDUFA4O00483 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA4O00483 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA4O00483 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA4O00483 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA4O00483 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA4O00483 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA4O00483 PTBP1P-201ENST00000554374 1601 ntBASIC15.4■□□□□ 0.06
NDUFA4O00483 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA4O00483 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA4O00483 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA4O00483 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
NDUFA4O00483 TSPY6P-201ENST00000448518 926 ntBASIC15.4■□□□□ 0.06
NDUFA4O00483 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.4■□□□□ 0.06
NDUFA4O00483 AC023632.3-201ENST00000521633 145 ntBASIC15.4■□□□□ 0.06
NDUFA4O00483 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.4■□□□□ 0.06
NDUFA4O00483 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.4■□□□□ 0.06
NDUFA4O00483 AC092118.2-201ENST00000613495 667 ntBASIC15.4■□□□□ 0.06
NDUFA4O00483 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
NDUFA4O00483 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
NDUFA4O00483 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA4O00483 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA4O00483 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
NDUFA4O00483 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NDUFA4O00483 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA4O00483 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.4■□□□□ 0.06
NDUFA4O00483 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.4■□□□□ 0.06
NDUFA4O00483 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA4O00483 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA4O00483 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.39■□□□□ 0.05
NDUFA4O00483 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.39■□□□□ 0.05
NDUFA4O00483 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA4O00483 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA4O00483 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA4O00483 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.39■□□□□ 0.05
NDUFA4O00483 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA4O00483 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA4O00483 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA4O00483 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.39■□□□□ 0.05
NDUFA4O00483 MIR4758-201ENST00000577688 71 ntBASIC15.39■□□□□ 0.05
NDUFA4O00483 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA4O00483 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA4O00483 KRT16P6-202ENST00000425692 1426 ntBASIC15.39■□□□□ 0.05
NDUFA4O00483 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.39■□□□□ 0.05
NDUFA4O00483 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA4O00483 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA4O00483 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA4O00483 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.39■□□□□ 0.05
NDUFA4O00483 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA4O00483 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NDUFA4O00483 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA4O00483 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms