Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3FO00303 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3FO00303 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3FO00303 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3FO00303 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
EIF3FO00303 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3FO00303 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.65■□□□□ 0.74
EIF3FO00303 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3FO00303 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3FO00303 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.65■□□□□ 0.74
EIF3FO00303 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3FO00303 GPX1P1-201ENST00000388829 606 ntBASIC19.65■□□□□ 0.74
EIF3FO00303 SLC29A4P1-201ENST00000398760 971 ntBASIC19.65■□□□□ 0.74
EIF3FO00303 MIPEPP3-201ENST00000412105 444 ntBASIC19.65■□□□□ 0.74
EIF3FO00303 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.65■□□□□ 0.74
EIF3FO00303 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3FO00303 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.65■□□□□ 0.74
EIF3FO00303 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
EIF3FO00303 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3FO00303 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3FO00303 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3FO00303 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3FO00303 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.65■□□□□ 0.74
EIF3FO00303 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3FO00303 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.65■□□□□ 0.74
EIF3FO00303 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3FO00303 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3FO00303 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3FO00303 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
EIF3FO00303 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
EIF3FO00303 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EIF3FO00303 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
EIF3FO00303 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
EIF3FO00303 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EIF3FO00303 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3FO00303 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
EIF3FO00303 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
EIF3FO00303 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3FO00303 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3FO00303 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3FO00303 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3FO00303 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.64■□□□□ 0.73
EIF3FO00303 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
EIF3FO00303 GUSBP6-202ENST00000438529 1198 ntBASIC19.64■□□□□ 0.73
EIF3FO00303 TSPY6P-201ENST00000448518 926 ntBASIC19.64■□□□□ 0.73
EIF3FO00303 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3FO00303 KRT16P6-202ENST00000425692 1426 ntBASIC19.64■□□□□ 0.73
EIF3FO00303 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3FO00303 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.64■□□□□ 0.73
EIF3FO00303 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.64■□□□□ 0.73
EIF3FO00303 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3FO00303 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3FO00303 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
EIF3FO00303 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.64■□□□□ 0.73
EIF3FO00303 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
EIF3FO00303 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3FO00303 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
EIF3FO00303 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3FO00303 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3FO00303 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
EIF3FO00303 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3FO00303 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3FO00303 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3FO00303 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3FO00303 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.63■□□□□ 0.73
EIF3FO00303 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.63■□□□□ 0.73
EIF3FO00303 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3FO00303 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.63■□□□□ 0.73
EIF3FO00303 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.63■□□□□ 0.73
EIF3FO00303 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.63■□□□□ 0.73
EIF3FO00303 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3FO00303 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.63■□□□□ 0.73
EIF3FO00303 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3FO00303 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3FO00303 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
EIF3FO00303 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3FO00303 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
EIF3FO00303 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3FO00303 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.62■□□□□ 0.73
EIF3FO00303 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
EIF3FO00303 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3FO00303 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
EIF3FO00303 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.62■□□□□ 0.73
EIF3FO00303 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
EIF3FO00303 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
EIF3FO00303 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
EIF3FO00303 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.62■□□□□ 0.73
EIF3FO00303 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3FO00303 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3FO00303 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.62■□□□□ 0.73
EIF3FO00303 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3FO00303 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.62■□□□□ 0.73
EIF3FO00303 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.62■□□□□ 0.73
EIF3FO00303 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3FO00303 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3FO00303 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3FO00303 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3FO00303 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.61■□□□□ 0.73
EIF3FO00303 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.61■□□□□ 0.73
EIF3FO00303 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms