Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TAF4O00268 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TAF4O00268 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TAF4O00268 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TAF4O00268 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.61■□□□□ 0.73
TAF4O00268 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TAF4O00268 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TAF4O00268 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TAF4O00268 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TAF4O00268 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TAF4O00268 MMP23A-201ENST00000234610 1017 ntBASIC19.61■□□□□ 0.73
TAF4O00268 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TAF4O00268 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TAF4O00268 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.61■□□□□ 0.73
TAF4O00268 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TAF4O00268 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.61■□□□□ 0.73
TAF4O00268 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.61■□□□□ 0.73
TAF4O00268 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.61■□□□□ 0.73
TAF4O00268 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TAF4O00268 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TAF4O00268 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TAF4O00268 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TAF4O00268 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.61■□□□□ 0.73
TAF4O00268 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TAF4O00268 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.61■□□□□ 0.73
TAF4O00268 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TAF4O00268 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TAF4O00268 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TAF4O00268 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TAF4O00268 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
TAF4O00268 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TAF4O00268 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TAF4O00268 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TAF4O00268 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.6■□□□□ 0.73
TAF4O00268 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.6■□□□□ 0.73
TAF4O00268 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TAF4O00268 AC110285.5-201ENST00000611501 352 ntBASIC19.6■□□□□ 0.73
TAF4O00268 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TAF4O00268 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TAF4O00268 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TAF4O00268 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TAF4O00268 AC061975.6-201ENST00000579045 1553 ntBASIC19.6■□□□□ 0.73
TAF4O00268 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TAF4O00268 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TAF4O00268 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.59■□□□□ 0.73
TAF4O00268 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.59■□□□□ 0.73
TAF4O00268 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.59■□□□□ 0.73
TAF4O00268 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TAF4O00268 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TAF4O00268 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TAF4O00268 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TAF4O00268 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.59■□□□□ 0.73
TAF4O00268 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.59■□□□□ 0.73
TAF4O00268 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TAF4O00268 AC005521.1-201ENST00000393351 872 ntBASIC19.59■□□□□ 0.73
TAF4O00268 AC091799.1-201ENST00000422823 811 ntBASIC19.59■□□□□ 0.73
TAF4O00268 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TAF4O00268 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TAF4O00268 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TAF4O00268 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
TAF4O00268 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TAF4O00268 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.58■□□□□ 0.73
TAF4O00268 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TAF4O00268 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TAF4O00268 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.58■□□□□ 0.73
TAF4O00268 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TAF4O00268 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TAF4O00268 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TAF4O00268 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TAF4O00268 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
TAF4O00268 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TAF4O00268 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TAF4O00268 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TAF4O00268 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.72
TAF4O00268 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TAF4O00268 KRT18P68-201ENST00000392293 1000 ntBASIC19.58■□□□□ 0.72
TAF4O00268 MCRIP2P1-201ENST00000394346 511 ntBASIC19.58■□□□□ 0.72
TAF4O00268 AC239809.2-201ENST00000415381 517 ntBASIC19.58■□□□□ 0.72
TAF4O00268 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
TAF4O00268 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.58■□□□□ 0.72
TAF4O00268 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
TAF4O00268 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
TAF4O00268 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TAF4O00268 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.58■□□□□ 0.72
TAF4O00268 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
TAF4O00268 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.58■□□□□ 0.72
TAF4O00268 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.58■□□□□ 0.72
TAF4O00268 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TAF4O00268 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.58■□□□□ 0.72
TAF4O00268 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TAF4O00268 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TAF4O00268 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
TAF4O00268 AC010542.4-201ENST00000563151 1910 ntBASIC19.57■□□□□ 0.72
TAF4O00268 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TAF4O00268 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TAF4O00268 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
TAF4O00268 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TAF4O00268 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
TAF4O00268 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TAF4O00268 RARRES2P10-201ENST00000564312 460 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms