Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TMEM88BA6NKF7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TMEM88BA6NKF7 AP000593.1-201ENST00000393668 712 ntBASIC23.57■■□□□ 1.36
TMEM88BA6NKF7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC23.57■■□□□ 1.36
TMEM88BA6NKF7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.57■■□□□ 1.36
TMEM88BA6NKF7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC23.57■■□□□ 1.36
TMEM88BA6NKF7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.57■■□□□ 1.36
TMEM88BA6NKF7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.57■■□□□ 1.36
TMEM88BA6NKF7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
TMEM88BA6NKF7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC23.57■■□□□ 1.36
TMEM88BA6NKF7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC23.57■■□□□ 1.36
TMEM88BA6NKF7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
TMEM88BA6NKF7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC23.57■■□□□ 1.36
TMEM88BA6NKF7 AC141257.4-201ENST00000634557 245 ntBASIC23.57■■□□□ 1.36
TMEM88BA6NKF7 AC136944.6-201ENST00000634818 245 ntBASIC23.57■■□□□ 1.36
TMEM88BA6NKF7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TMEM88BA6NKF7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TMEM88BA6NKF7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM88BA6NKF7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.56■■□□□ 1.36
TMEM88BA6NKF7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM88BA6NKF7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
TMEM88BA6NKF7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
TMEM88BA6NKF7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.56■■□□□ 1.36
TMEM88BA6NKF7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC23.56■■□□□ 1.36
TMEM88BA6NKF7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM88BA6NKF7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM88BA6NKF7 AC023511.2-201ENST00000618803 211 ntBASIC23.56■■□□□ 1.36
TMEM88BA6NKF7 AC130371.2-201ENST00000619443 611 ntBASIC23.56■■□□□ 1.36
TMEM88BA6NKF7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM88BA6NKF7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.56■■□□□ 1.36
TMEM88BA6NKF7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 ANKRD20A18P-201ENST00000359341 492 ntBASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 KRT18P16-201ENST00000510337 1294 ntBASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 AL031432.5-201ENST00000641059 760 ntBASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.55■■□□□ 1.36
TMEM88BA6NKF7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
TMEM88BA6NKF7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
TMEM88BA6NKF7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TMEM88BA6NKF7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
TMEM88BA6NKF7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.54■■□□□ 1.36
TMEM88BA6NKF7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC23.54■■□□□ 1.36
TMEM88BA6NKF7 CCR12P-201ENST00000446203 998 ntBASIC23.54■■□□□ 1.36
TMEM88BA6NKF7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
TMEM88BA6NKF7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TMEM88BA6NKF7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.54■■□□□ 1.36
TMEM88BA6NKF7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
TMEM88BA6NKF7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TMEM88BA6NKF7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TMEM88BA6NKF7 AL359075.1-203ENST00000462729 1002 ntBASIC23.53■■□□□ 1.36
TMEM88BA6NKF7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC23.53■■□□□ 1.36
TMEM88BA6NKF7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TMEM88BA6NKF7 C1QL1P1-201ENST00000568105 661 ntBASIC23.53■■□□□ 1.36
TMEM88BA6NKF7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TMEM88BA6NKF7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.52■■□□□ 1.36
TMEM88BA6NKF7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
TMEM88BA6NKF7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.52■■□□□ 1.36
TMEM88BA6NKF7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM88BA6NKF7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM88BA6NKF7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM88BA6NKF7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC23.52■■□□□ 1.36
TMEM88BA6NKF7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC23.52■■□□□ 1.36
TMEM88BA6NKF7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM88BA6NKF7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.52■■□□□ 1.36
TMEM88BA6NKF7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM88BA6NKF7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM88BA6NKF7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM88BA6NKF7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC23.52■■□□□ 1.36
TMEM88BA6NKF7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM88BA6NKF7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM88BA6NKF7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM88BA6NKF7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.51■■□□□ 1.35
TMEM88BA6NKF7 AC010653.2-201ENST00000623505 997 ntBASIC23.51■■□□□ 1.35
TMEM88BA6NKF7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM88BA6NKF7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM88BA6NKF7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC23.51■■□□□ 1.35
TMEM88BA6NKF7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM88BA6NKF7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM88BA6NKF7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMEM88BA6NKF7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMEM88BA6NKF7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.5■■□□□ 1.35
TMEM88BA6NKF7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMEM88BA6NKF7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
TMEM88BA6NKF7 AC004980.1-204ENST00000429707 299 ntBASIC23.5■■□□□ 1.35
TMEM88BA6NKF7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC23.5■■□□□ 1.35
TMEM88BA6NKF7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.5■■□□□ 1.35
TMEM88BA6NKF7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC23.5■■□□□ 1.35
TMEM88BA6NKF7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms