Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 AC120498.9-201ENST00000339021 3867 ntBASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 AC020763.4-201ENST00000623414 4170 ntBASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF103-CHMP3A0A140T963 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF103-CHMP3A0A140T963 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF103-CHMP3A0A140T963 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF103-CHMP3A0A140T963 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF103-CHMP3A0A140T963 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF103-CHMP3A0A140T963 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF103-CHMP3A0A140T963 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RNF103-CHMP3A0A140T963 KRT18P20-201ENST00000548986 1279 ntBASIC19.27■□□□□ 0.68
RNF103-CHMP3A0A140T963 AC090340.1-201ENST00000620778 4980 ntBASIC19.27■□□□□ 0.68
RNF103-CHMP3A0A140T963 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF103-CHMP3A0A140T963 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF103-CHMP3A0A140T963 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF103-CHMP3A0A140T963 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RNF103-CHMP3A0A140T963 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.27■□□□□ 0.67
RNF103-CHMP3A0A140T963 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.27■□□□□ 0.67
RNF103-CHMP3A0A140T963 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF103-CHMP3A0A140T963 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.27■□□□□ 0.67
RNF103-CHMP3A0A140T963 AC116050.2-201ENST00000612102 1779 ntBASIC19.27■□□□□ 0.67
RNF103-CHMP3A0A140T963 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF103-CHMP3A0A140T963 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF103-CHMP3A0A140T963 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms