Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 FAM21FP-204ENST00000608637 956 ntBASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 DPP3P2-201ENST00000416030 1696 ntBASIC16.77■□□□□ 0.28
TRBV6-7A0A0A0MS04 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV6-7A0A0A0MS04 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
TRBV6-7A0A0A0MS04 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.77■□□□□ 0.27
TRBV6-7A0A0A0MS04 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV6-7A0A0A0MS04 AC004854.2-201ENST00000608450 1441 ntBASIC16.77■□□□□ 0.27
TRBV6-7A0A0A0MS04 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV6-7A0A0A0MS04 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.77■□□□□ 0.27
TRBV6-7A0A0A0MS04 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV6-7A0A0A0MS04 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV6-7A0A0A0MS04 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.77■□□□□ 0.27
TRBV6-7A0A0A0MS04 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV6-7A0A0A0MS04 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV6-7A0A0A0MS04 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 AC019069.1-201ENST00000610008 1333 ntBASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 NEFHP1-201ENST00000412845 2629 ntBASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 KRT18P14-201ENST00000534205 1250 ntBASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRBV6-7A0A0A0MS04 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 AC093503.3-201ENST00000624917 2352 ntBASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-7A0A0A0MS04 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms