Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 AC008764.7-201ENST00000593779 1081 ntBASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 AC116050.2-201ENST00000612102 1779 ntBASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV18A0A075B6X5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 TREX1-205ENST00000625293 1783 ntBASIC17.22■□□□□ 0.35
TRAV18A0A075B6X5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 AC024257.2-201ENST00000549699 147 ntBASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 AC090340.1-201ENST00000620778 4980 ntBASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV18A0A075B6X5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.21■□□□□ 0.34
TRAV18A0A075B6X5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV18A0A075B6X5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV18A0A075B6X5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV18A0A075B6X5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV18A0A075B6X5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.21■□□□□ 0.34
TRAV18A0A075B6X5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV18A0A075B6X5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms