Protein–RNA interactions for Protein: A0A075B6N3

TRBV24-1, T-cell receptor beta variable 24-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV24-1A0A075B6N3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV24-1A0A075B6N3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV24-1A0A075B6N3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV24-1A0A075B6N3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV24-1A0A075B6N3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV24-1A0A075B6N3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 AC139713.2-201ENST00000641328 2723 ntBASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 AL499627.2-201ENST00000606283 725 ntBASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 AC090164.3-201ENST00000610780 2143 ntBASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 AL354751.1-201ENST00000412768 1863 ntBASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRBV24-1A0A075B6N3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 BICD1-207ENST00000551848 1962 ntBASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV24-1A0A075B6N3 AL691432.2-201ENST00000607222 2038 ntBASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.27■□□□□ 0.04
TRBV24-1A0A075B6N3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV24-1A0A075B6N3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.27■□□□□ 0.03
TRBV24-1A0A075B6N3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.27■□□□□ 0.03
TRBV24-1A0A075B6N3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV24-1A0A075B6N3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV24-1A0A075B6N3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV24-1A0A075B6N3 AC090340.1-201ENST00000620778 4980 ntBASIC15.27■□□□□ 0.03
TRBV24-1A0A075B6N3 MKRN4P-201ENST00000444706 1521 ntBASIC15.27■□□□□ 0.03
TRBV24-1A0A075B6N3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
TRBV24-1A0A075B6N3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV24-1A0A075B6N3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
TRBV24-1A0A075B6N3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV24-1A0A075B6N3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV24-1A0A075B6N3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV24-1A0A075B6N3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV24-1A0A075B6N3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV24-1A0A075B6N3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV24-1A0A075B6N3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV24-1A0A075B6N3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV24-1A0A075B6N3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TRBV24-1A0A075B6N3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV24-1A0A075B6N3 BHLHE23-202ENST00000612929 1109 ntBASIC15.26■□□□□ 0.03
TRBV24-1A0A075B6N3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.26■□□□□ 0.03
TRBV24-1A0A075B6N3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRBV24-1A0A075B6N3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms