Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8□□□□□ -1.13
MTHFRP42898 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MTHFRP42898 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
MTHFRP42898 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
MTHFRP42898 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MTHFRP42898 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MTHFRP42898 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MTHFRP42898 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8□□□□□ -1.13
MTHFRP42898 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC8□□□□□ -1.13
MTHFRP42898 AC023632.6-201ENST00000624338 2177 ntBASIC8□□□□□ -1.13
MTHFRP42898 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8□□□□□ -1.13
MTHFRP42898 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
MTHFRP42898 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MTHFRP42898 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MTHFRP42898 AC093844.1-201ENST00000514910 1361 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
MTHFRP42898 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
MTHFRP42898 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
MTHFRP42898 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MTHFRP42898 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MTHFRP42898 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC7.99□□□□□ -1.13
MTHFRP42898 AL590065.1-201ENST00000603371 4774 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.99□□□□□ -1.13
MTHFRP42898 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
MTHFRP42898 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MTHFRP42898 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
MTHFRP42898 RNU1-38P-201ENST00000362817 144 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC7.99□□□□□ -1.13
MTHFRP42898 AL034417.1-201ENST00000399343 800 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 SOCS5P5-201ENST00000402732 1586 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
MTHFRP42898 GAS8-AS1-201ENST00000408886 435 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 AL662791.3-201ENST00000413771 776 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 AC023141.10-201ENST00000415634 200 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC7.99□□□□□ -1.13
MTHFRP42898 CYP4F34P-201ENST00000425951 481 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
MTHFRP42898 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC7.99□□□□□ -1.13
MTHFRP42898 AL604028.2-201ENST00000437848 788 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC7.99□□□□□ -1.13
MTHFRP42898 AC019080.2-201ENST00000453859 394 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 SCDP1-201ENST00000455244 1081 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 RBMY2EP-202ENST00000456360 940 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 RN7SL688P-201ENST00000471754 275 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.99□□□□□ -1.13
MTHFRP42898 AL445187.1-201ENST00000502685 260 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC7.99□□□□□ -1.13
MTHFRP42898 MTND6P19-201ENST00000519399 524 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC7.99□□□□□ -1.13
MTHFRP42898 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.99□□□□□ -1.13
MTHFRP42898 PDCL3P1-201ENST00000534575 734 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.99□□□□□ -1.13
MTHFRP42898 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.99□□□□□ -1.13
MTHFRP42898 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.99□□□□□ -1.13
MTHFRP42898 AC061975.3-201ENST00000583209 244 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 AC004852.1-201ENST00000605206 154 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 U91328.4-201ENST00000608919 517 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 7SK.12-201ENST00000612820 244 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 AL391903.2-201ENST00000614532 247 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 HTR1DP1-201ENST00000616500 888 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 AC243830.2-201ENST00000618067 630 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.99□□□□□ -1.13
MTHFRP42898 MIR6813-201ENST00000621638 56 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 AC087045.3-201ENST00000623046 2468 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 AC131649.2-201ENST00000624925 4439 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 AC005355.2-201ENST00000625064 484 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.99□□□□□ -1.13
MTHFRP42898 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.99□□□□□ -1.13
MTHFRP42898 OR52K3P-202ENST00000641797 1729 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MTHFRP42898 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MTHFRP42898 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
MTHFRP42898 WASF5P-205ENST00000428639 1455 ntBASIC7.99□□□□□ -1.13
MTHFRP42898 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
MTHFRP42898 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MTHFRP42898 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
MTHFRP42898 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
MTHFRP42898 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
MTHFRP42898 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
MTHFRP42898 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
MTHFRP42898 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
MTHFRP42898 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
MTHFRP42898 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
MTHFRP42898 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
MTHFRP42898 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
MTHFRP42898 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.98□□□□□ -1.13
MTHFRP42898 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
MTHFRP42898 AC090114.1-201ENST00000393266 448 ntBASIC7.98□□□□□ -1.13
MTHFRP42898 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.98□□□□□ -1.13
MTHFRP42898 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.98□□□□□ -1.13
MTHFRP42898 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC7.98□□□□□ -1.13
MTHFRP42898 GAPDHP34-201ENST00000432112 823 ntBASIC7.98□□□□□ -1.13
MTHFRP42898 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC7.98□□□□□ -1.13
MTHFRP42898 AC114940.1-201ENST00000512162 1265 ntBASIC7.98□□□□□ -1.13
MTHFRP42898 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.98□□□□□ -1.13
MTHFRP42898 AP001636.1-201ENST00000531997 1122 ntBASIC7.98□□□□□ -1.13
MTHFRP42898 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.98□□□□□ -1.13
MTHFRP42898 AC090912.1-201ENST00000578831 570 ntTSL 4 BASIC7.98□□□□□ -1.13
MTHFRP42898 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.98□□□□□ -1.13
MTHFRP42898 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms