Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC005614.1-201ENST00000598952 3653 ntBASIC7.93□□□□□ -1.14
LMO3Q8TAP4 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 RNA5SP218-201ENST00000363188 109 ntBASIC7.93□□□□□ -1.14
LMO3Q8TAP4 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 AL355862.1-201ENST00000412705 353 ntBASIC7.93□□□□□ -1.14
LMO3Q8TAP4 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 RPL6P2-201ENST00000425480 783 ntBASIC7.93□□□□□ -1.14
LMO3Q8TAP4 PRPS1P2-201ENST00000430496 937 ntBASIC7.93□□□□□ -1.14
LMO3Q8TAP4 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 PYM1-204ENST00000454792 884 ntTSL 2 BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 RN7SL516P-201ENST00000496127 297 ntBASIC7.93□□□□□ -1.14
LMO3Q8TAP4 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 AC106774.2-201ENST00000510266 406 ntBASIC7.93□□□□□ -1.14
LMO3Q8TAP4 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 AC023310.4-201ENST00000613130 650 ntBASIC7.93□□□□□ -1.14
LMO3Q8TAP4 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 uc_338.21-201ENST00000622458 147 ntBASIC7.93□□□□□ -1.14
LMO3Q8TAP4 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 AL606490.2-201ENST00000457562 1330 ntBASIC7.93□□□□□ -1.14
LMO3Q8TAP4 AC092999.1-201ENST00000624004 1924 ntBASIC7.93□□□□□ -1.14
LMO3Q8TAP4 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
LMO3Q8TAP4 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 AP000766.1-201ENST00000561746 4140 ntBASIC7.92□□□□□ -1.14
LMO3Q8TAP4 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 RN7SKP211-201ENST00000363328 315 ntBASIC7.92□□□□□ -1.14
LMO3Q8TAP4 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 SNORA3.1-201ENST00000408166 111 ntBASIC7.92□□□□□ -1.14
LMO3Q8TAP4 GYG1P2-201ENST00000426437 1006 ntBASIC7.92□□□□□ -1.14
LMO3Q8TAP4 AC090142.2-201ENST00000483263 416 ntBASIC7.92□□□□□ -1.14
LMO3Q8TAP4 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 HSPE1P10-201ENST00000508631 558 ntBASIC7.92□□□□□ -1.14
LMO3Q8TAP4 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 AL035422.2-201ENST00000603059 565 ntBASIC7.92□□□□□ -1.14
LMO3Q8TAP4 RPS28P1-201ENST00000604589 187 ntBASIC7.92□□□□□ -1.14
LMO3Q8TAP4 AL592504.1-201ENST00000605319 439 ntBASIC7.92□□□□□ -1.14
LMO3Q8TAP4 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 AC130456.1-201ENST00000565085 1363 ntBASIC7.92□□□□□ -1.14
LMO3Q8TAP4 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
LMO3Q8TAP4 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 RNA5SP238-201ENST00000365464 120 ntBASIC7.91□□□□□ -1.14
LMO3Q8TAP4 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 FDPSP1-201ENST00000424976 1071 ntBASIC7.91□□□□□ -1.14
LMO3Q8TAP4 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 AC114755.4-201ENST00000439114 443 ntBASIC7.91□□□□□ -1.14
LMO3Q8TAP4 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 RPL23P10-201ENST00000468780 412 ntBASIC7.91□□□□□ -1.14
LMO3Q8TAP4 RPL7AP56-201ENST00000476420 791 ntBASIC7.91□□□□□ -1.14
LMO3Q8TAP4 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC7.91□□□□□ -1.14
LMO3Q8TAP4 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms