Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 HSPD1P4-201ENST00000547203 1702 ntBASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 SNORD46-201ENST00000364043 104 ntBASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 SNORD15A-201ENST00000384214 148 ntBASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 AL645634.1-201ENST00000418426 462 ntTSL 3 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 OR5P4P-201ENST00000424698 917 ntBASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 AL137074.1-201ENST00000442640 465 ntBASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 AL024493.1-201ENST00000449217 833 ntBASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 LINC00520-206ENST00000560336 883 ntTSL 3 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 AC012181.2-201ENST00000570210 699 ntBASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 AL031429.2-201ENST00000602605 649 ntBASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 AC139792.1-201ENST00000607051 647 ntBASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 pRNA.12-201ENST00000614353 90 ntBASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 pRNA.3-201ENST00000615048 90 ntBASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 SLC20A1P2-201ENST00000618036 966 ntBASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 AC005609.2-201ENST00000623320 592 ntBASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 ZBTB20-AS5-203ENST00000628886 819 ntTSL 5 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 AC016930.1-201ENST00000468766 2205 ntBASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
NPIPA3F8WFD2 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 EEF1A1P4-201ENST00000359165 1405 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 RNA5SP79-201ENST00000365193 109 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 SSX9-201ENST00000376909 591 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AL139327.1-201ENST00000382988 348 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 EEF1A1P34-201ENST00000419888 1267 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 RN7SL145P-201ENST00000469955 296 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 NDUFS5P2-201ENST00000484004 306 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 RN7SL388P-201ENST00000498736 339 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 SUMO2P17-201ENST00000504438 285 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AC100823.2-201ENST00000518337 699 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 BTF3P1-201ENST00000522014 495 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 FOLH1B-202ENST00000529567 2145 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AP001636.1-201ENST00000531997 1122 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AP005597.1-201ENST00000534192 802 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 DNM1P31-201ENST00000564149 696 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms